Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_1175 |
Symbol | |
ID | 7112304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 1290546 |
End bp | 1291271 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643479442 |
Product | protein of unknown function DUF558 |
Protein accession | YP_002376494 |
Protein GI | 218438165 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTATC GATTAGTGAT TGAACCGACC CAAAAACAAC AGGAATGGGT CAACTTAACT GAGCAACAAC TTCATTATCT CAGACGAGTT TTGAGATTAA AAAACGGCGC TCATTTTATC GTTATGGACG GACAAGGAAA CGTCTGGAAC GCCATCTTAC ACGAAAACTC CGCCCAACTT TTAGATATTA TCACAACCTC AACGGAATTG TCGATTAAAT TAACCCTAAT GGTCGCTTTA CCTAAAGGAA ATGGGTTTGA AGATATCGTC AGGAGTTGTA CCGAATTAGG AGTAAATACT TTTATTCCCG TTATCAGTGA ACGAACTTTA TTAAATCCTA GTCCTCAAAA AGTTGAACGT TGGCGTAAAA TTGCCATAGA AGCGGCTGAA CAGTCAGAAA GAGAAATTAT CCCTCAAATT TTTGAGCCTA TAAATTTTCC TACCGCATTA ACAAAAATCA AAGAAATAGA GACAAATAAA TATATTTGTG TTACTCGTAG AGAAGAAGTC AATCATTTAT TCATTCATTT ACAAAAACCC CTTTTAAACT CTCTGGTGGT TGCCACTGGG CCAGAAGGAG GATGGACGAA TCTAGAAGTA CAAACGGCGA TTAAAGCCGG ATTTGAACCG GTTTCTTTAG GTCGTCGCAT TTTACGGGCG GTTACTGCTC CAGTCTATAT TGCTTCTCTT GTTAGTGCAG TAGGAGAAAC TCATTCTATG TCTTGA
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Protein sequence | MTYRLVIEPT QKQQEWVNLT EQQLHYLRRV LRLKNGAHFI VMDGQGNVWN AILHENSAQL LDIITTSTEL SIKLTLMVAL PKGNGFEDIV RSCTELGVNT FIPVISERTL LNPSPQKVER WRKIAIEAAE QSEREIIPQI FEPINFPTAL TKIKEIETNK YICVTRREEV NHLFIHLQKP LLNSLVVATG PEGGWTNLEV QTAIKAGFEP VSLGRRILRA VTAPVYIASL VSAVGETHSM S
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