Gene PCC7424_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1175 
Symbol 
ID7112304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp1290546 
End bp1291271 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content39% 
IMG OID643479442 
Productprotein of unknown function DUF558 
Protein accessionYP_002376494 
Protein GI218438165 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTATC GATTAGTGAT TGAACCGACC CAAAAACAAC AGGAATGGGT CAACTTAACT 
GAGCAACAAC TTCATTATCT CAGACGAGTT TTGAGATTAA AAAACGGCGC TCATTTTATC
GTTATGGACG GACAAGGAAA CGTCTGGAAC GCCATCTTAC ACGAAAACTC CGCCCAACTT
TTAGATATTA TCACAACCTC AACGGAATTG TCGATTAAAT TAACCCTAAT GGTCGCTTTA
CCTAAAGGAA ATGGGTTTGA AGATATCGTC AGGAGTTGTA CCGAATTAGG AGTAAATACT
TTTATTCCCG TTATCAGTGA ACGAACTTTA TTAAATCCTA GTCCTCAAAA AGTTGAACGT
TGGCGTAAAA TTGCCATAGA AGCGGCTGAA CAGTCAGAAA GAGAAATTAT CCCTCAAATT
TTTGAGCCTA TAAATTTTCC TACCGCATTA ACAAAAATCA AAGAAATAGA GACAAATAAA
TATATTTGTG TTACTCGTAG AGAAGAAGTC AATCATTTAT TCATTCATTT ACAAAAACCC
CTTTTAAACT CTCTGGTGGT TGCCACTGGG CCAGAAGGAG GATGGACGAA TCTAGAAGTA
CAAACGGCGA TTAAAGCCGG ATTTGAACCG GTTTCTTTAG GTCGTCGCAT TTTACGGGCG
GTTACTGCTC CAGTCTATAT TGCTTCTCTT GTTAGTGCAG TAGGAGAAAC TCATTCTATG
TCTTGA
 
Protein sequence
MTYRLVIEPT QKQQEWVNLT EQQLHYLRRV LRLKNGAHFI VMDGQGNVWN AILHENSAQL 
LDIITTSTEL SIKLTLMVAL PKGNGFEDIV RSCTELGVNT FIPVISERTL LNPSPQKVER
WRKIAIEAAE QSEREIIPQI FEPINFPTAL TKIKEIETNK YICVTRREEV NHLFIHLQKP
LLNSLVVATG PEGGWTNLEV QTAIKAGFEP VSLGRRILRA VTAPVYIASL VSAVGETHSM
S