| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1165 |
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| Symbol | |
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| ID | 7112294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 1274414 |
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| End bp | 1277545 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643479432 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002376484 |
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| Protein GI | 218438155 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.749117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGTTG ATTTTTTTAT TAAACGTCCA GTTTTTTCGA CGGTCTGCGC CATAATTATT
CTGTTGGTGG GGACAATTAG TATTTTTACT CTGCCGGTAG ACCGGTTTCC CGATATCAGT
CCGACTCAAG TTCAGGTGAC AGCCACCTAT AACGGGGCTA ATGCTCAAGT GGTTGAAAAT
GCTGTTACTA ACATTTTGGA GCGACAAATT AACGGTGTAG AAGGGATGAA ATATATCACT
TCTAGCAGTA GTAACGATGG AACGAGTAGT ATTACCGTTA CCTTTGATTC CTCCCGTGAT
AAAGACATTG CTGCCGTTGA TGTCCAAAAT CAAGTTGCCT TAGTTGAACC TCAACTGCCC
GAAGATGTAC AACGTTTAGG GGTTCAAGTG AGTAAACAGT CCAATAATAT TTTGTTGGGA
ATTGGGTTAT ATGATGAAAA TCAACAGTAT GACAATGTTT TTCTCAGTAA TTATGCTGAT
CGCTATATCG TCGATGCTTT AAAAAGAATC GAAGGGGTGG GCAATGTGCG TATTTTTGGA
GAACGTCGCT ATGCTATGCG GTTATGGTTA GATCCGGTTC GGCTAGCCAG TCGAGGGCTA
ACGATGCAAG ACGTGATTCA AGCGCTTTCA GAACAAAATA TACAAGTTGG GGCGGGAAAA
ATCGGGGCAC AACCGGCTCC AGAAGGACAA CAATATCAGT TAGATATTAG AGCCGAAAGT
CAATTAAGCG ATCCCGGAGA ATTTGAAAAT TTATTACTTA AGGCAGATGA AAATGTGGGC
TTGGTTCGTC TGAGAGATGT AGGACGAGCC GAATTAGGGG CACAAGATTA TAACTCTTTC
ATTCGCTATC GAGGACAAGA AGCCGTAGGA GTTGGGATTT ATCAGTTAAC GGGTTCTAAT
GCTCTACAAG TGGCTCACAA AGTTAAACAA GCAATGGAAG AATTAGCGAC CACTTTTCCG
GCTGGAGTTA GGTATCAAGT CGCCTTTGAT ACCACCCTTT TTATTGAAGA GTCTTTAAGA
GAAGTTGTCA TTACCCTATT GATGGCGGTG GGGTTAGTGG TTCTCGTCAT TCTCATCTTT
TTACAAGATT GGCGGACGAC CTTAATTCCT TCTATTACCA TTCCCGTCGC TTTGGTGGGG
ACTTTTGCTT ATGTTAAAGT GTTCGGCTTT TCGCTCAATA GTTTAACCCT CTTTGGACTG
ACTCTAGCTA CAGGGATGGT GGTGGATGAT GCGATCATTG TTGTTGAACA AATTAGCCGT
TATATTCAAG AACGGGGAAT GAGTCCCCAA GAAGCCGCTA GCCAAGCTAT GAAGGAATTA
TTTGGGGCGG TTATTGCCAC CTCTTTAGTC TTATTGGCGG TATTTGTGCC GGTGGCGTTC
TTTCCGGGGA CAACGGGGGC ACTCTATCAA CAATTTGCTC TGACGATCGC ATTTTCGATC
ACGATTTCTA CCTTTTTAGC CGTAACCCTC ACCCCTTCCT TGTGTGCCTT AATGTTGCGT
CCAGACTCCA GCATACCGGG CTGGTTAATG GTGATTTTTG GCAAATTTAA CGATTTTCTC
GACTGGACAA GACAGGGTTA TCGGCGATCG CTCATTTTTT TGGCTCGGAT TAGACCTATC
GTGATGATCG TCTTTGCAGG TTTGTTAGGG GCAACCGCTT GGTTATACGT ACAAGTTCCC
AATGCTTTCC TTCCCCAAGA AGATGAAGGC TACTTTATGA CGATTATACA AGCGCCTGAA
GGGGTATCTT TGCAATACAC GAGTGAGGTG ATGAAAAAGG TCGAGGCCGC GATCCTCGAA
GAACCGGAAA TCCGAGCCAC CTTTGCTATT GGAGGGTTTG CCTTTAGCGG AAGTACCCCC
AACCAGGGGA TTATTTTTTG CCCTCTCAAA CCTTGGGAAG AACGCCAAGG GCCTCAAAGT
ACCGCAGAGG CAGTGATTGG TCGACTGTGG GGGAAATTTG CTCAAATTCC AGAGGCGAGA
ATTTTACCGA TTAATCCGCC GGCGATTAGA AGTTTAGGGA ATTTTGGCGG GTTTGTGTTT
CAGTTGCAGG ATCGACGGGC TAATGCGGAT TTTCCTTCGT TTATGGAATC CTTGGGTCAA
TTATTAGGAC AAGCGAATCA AAACCCCAAT TTACAGCGCG TTTTTACCAC ATTTACCGCT
AATACACCTC AGTTAATTGT CGATGTCGAT CGTAACCGGG CTAAAGCGTT ACAAGTCTCG
ATTGATGAGA TTTTTAATAC TTTACAAACG GCATTAGGGG GGCAATACGT CAATGATTTC
ACCTTACAAC AACGTACCTA TAGGGTATAT GTCCAGGCAG ATGAACAATT TAGGGCAAAT
CCGGAGGATA TTGGTCGGCT TTATGTTCGT TCAGAGAATG ATCAGATGAT TCCGATCGGT
AATTTAGTGA ATATTAGACG AGCAGTAGGG CCTCAAACCA TTAATCATTT CAACTTATAT
CGCTCCATTG AGGTTACCGG TTCAGCAGGT CCTGGGGTAA GTTCAGGACA GGCGATGGAC
TCAATGGAGA CTGTAGCTAC CCAAGCACTT GCCCCCGGAT TGGGTTATGA GTGGTCGGGA
ATTTCTTTAG AGGAAGTAGA ATCAGGAGGA TTAGCTCCGT TAATTTTTGG GTTGGGTTTA
TTGTTTGTGT TTTTAGTTTT GGCTGCGCAG TATGAGAATT ATATTGATCC GTTGATTATT
ATGTTGGCTG TTCCTTTGGC AATTTTGGGG GCTTTATTAG CTCAAATGTT GCGGGGATTT
CCTAATGATG TTTACTGTCA AATTGGGTTA GTCATGTTAA TTGGTTTGGC GAGTAAGAAT
TCAATTTTAA TTGTCGAATT TGCCAATCAA TTAAGAGAGG AAGGATTACC GATTGTAAAG
GCGGCAATTG AGGCATCCCA AGAACGATTA AGACCGATTT TAATGACCGC AATTTCGACG
TTATTAGGGA TTTTTCCTCT CGTTATTGCG GTAGGAGCCG GGTCAGCCAG CCGTCAATCT
TTGGGTACGG CGGTGTTTGG AGGGATGTTA ATTGCTACGT TTTTAAGTTT GTTTATCGTG
CCGATTTTGT ATATTGTTAT TAAGTCTTTT ACTGAACAAC TTTGGCCGAA AAAATCAGCC
GTTAAACATT AA
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| Protein sequence | MFVDFFIKRP VFSTVCAIII LLVGTISIFT LPVDRFPDIS PTQVQVTATY NGANAQVVEN
AVTNILERQI NGVEGMKYIT SSSSNDGTSS ITVTFDSSRD KDIAAVDVQN QVALVEPQLP
EDVQRLGVQV SKQSNNILLG IGLYDENQQY DNVFLSNYAD RYIVDALKRI EGVGNVRIFG
ERRYAMRLWL DPVRLASRGL TMQDVIQALS EQNIQVGAGK IGAQPAPEGQ QYQLDIRAES
QLSDPGEFEN LLLKADENVG LVRLRDVGRA ELGAQDYNSF IRYRGQEAVG VGIYQLTGSN
ALQVAHKVKQ AMEELATTFP AGVRYQVAFD TTLFIEESLR EVVITLLMAV GLVVLVILIF
LQDWRTTLIP SITIPVALVG TFAYVKVFGF SLNSLTLFGL TLATGMVVDD AIIVVEQISR
YIQERGMSPQ EAASQAMKEL FGAVIATSLV LLAVFVPVAF FPGTTGALYQ QFALTIAFSI
TISTFLAVTL TPSLCALMLR PDSSIPGWLM VIFGKFNDFL DWTRQGYRRS LIFLARIRPI
VMIVFAGLLG ATAWLYVQVP NAFLPQEDEG YFMTIIQAPE GVSLQYTSEV MKKVEAAILE
EPEIRATFAI GGFAFSGSTP NQGIIFCPLK PWEERQGPQS TAEAVIGRLW GKFAQIPEAR
ILPINPPAIR SLGNFGGFVF QLQDRRANAD FPSFMESLGQ LLGQANQNPN LQRVFTTFTA
NTPQLIVDVD RNRAKALQVS IDEIFNTLQT ALGGQYVNDF TLQQRTYRVY VQADEQFRAN
PEDIGRLYVR SENDQMIPIG NLVNIRRAVG PQTINHFNLY RSIEVTGSAG PGVSSGQAMD
SMETVATQAL APGLGYEWSG ISLEEVESGG LAPLIFGLGL LFVFLVLAAQ YENYIDPLII
MLAVPLAILG ALLAQMLRGF PNDVYCQIGL VMLIGLASKN SILIVEFANQ LREEGLPIVK
AAIEASQERL RPILMTAIST LLGIFPLVIA VGAGSASRQS LGTAVFGGML IATFLSLFIV
PILYIVIKSF TEQLWPKKSA VKH
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