Gene PCC7424_1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_1085 
Symbol 
ID7112070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp1193300 
End bp1193590 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content43% 
IMG OID643479354 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_002376406 
Protein GI218438077 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.239557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATTT ATGTAGGAAA CCTCCCTTTT GAAGTTGAAG AAAAGCACAT CAACGACGTT 
TTTGCTGACT ATGGACAGGT TAAACGAGTT TATATGCCAG TAGACCGAGA AACGGGTCGT
CGTCGAGGGT TTGCTTTTGT AGAAATGGAA ACTCAATCCC AAGAAGCTTC AGCTATTGCG
GAATTAGACC GGGCTGAATG GATGGGAAGA CAACTCAAAG TTAATAAAGC CAGAGAACGG
GAAGAAAGAA GCAGAGACGG GGGCGGATAC AGAAACAAAT CTCGTTTCTA A
 
Protein sequence
MSIYVGNLPF EVEEKHINDV FADYGQVKRV YMPVDRETGR RRGFAFVEME TQSQEASAIA 
ELDRAEWMGR QLKVNKARER EERSRDGGGY RNKSRF