| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1083 |
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| Symbol | |
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| ID | 7112068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 1189894 |
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| End bp | 1192332 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643479352 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002376404 |
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| Protein GI | 218438075 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.218978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCAAA ACTTTAAACC CCTAAAAATT CCGCCCTATA GCCTAGCGAT TATATGTCCT
TTGTTAGCTT TAGGGGTGCG ATATCTTTTA AATTGGGCTT TAGGAAATAA TGCTCCTTTA
TTAATCTTTA TTATTCCTGT CATTATTACT GCTTGGTATG GAGGATTACT ACCTGGGATA
CTATCGACTG TTATTAGTGC TTATTTAGGA AATTATTTTT TTATTCATCC TACTGAACAA
TTTAAAATTC TTTCACTTCC TGAAACTGTT CGGATCATCA TTTTTTTGTC GGAAGGAATT
TTTCTGAGTA TATTTTTTGA GTATTATAAA CGATTAAATA CTAAAACGTC TCAAATCGTA
GAATCGTTAC GAGAAAGTGA AGAACGATAT CGATTATTAG TAGAAGGAAT AGAAGATTAT
GGGATTTTTA TGCTTGATGG ACAGGGAAGA ATTATTAGCT GGAATTTGGG AGCAGAACGC
ATTCAAGGGT ATCAATCTAC GGAAATTATA GGGCGACATT ATTCTATTTT TTTTACCACA
ACTGACACCA GTGCTAAAGT TCCCGAAAAA ATTCTGCAAA CTGCCCTTAA ACAAGGACGT
TTTAAAGGGG AAGGATGGCG ACGACGGAAA GATGGCTCTC TATTTTGGGC GAGTATAGTT
TTGAGTCCAG TTTTTGCTCA AAACAGGCAG TTAAAAGGGT TCGCTAAAAT TACTAGAGAT
ATTAGTGAAC GCAAACAAGC AGAGGTTCAG AAAAATAAAC TTCTCAAAGA TTTGACTGAT
TTAAAATTAG CCTTAGATCA ATCAGCCATT GTCGCTGTTA CTAACTCTCA AGGAATTATT
ACCGCCGTCA ATGATCAATT TTGTCAAATT TCCGGCTATT CTAAAGAGGA ATTAATCGGA
AAAACTCATC GGATCATTAA TTCAGGATAT CACTCAAAAA AATTTTTTCA ACAGTTGTGG
GCTACTATTT CTCAAGGAAA AATATGGCGA GGAGAAATTT GTAATCGAAG TAAAACAGGA
CAATTTTACT GGGTAGCTAC CACCATTGTT CCCTTTTTAA ATCAAAACAA TCAACCTTTT
CAATATTTTG CCATTCGCTT TGATATTACC CAACGGAAAC TGGCAGAAAA AAGATTGCGC
CATGAAGTGT TACATGATTC TTTAACTGGG TTGCCCAACC GTACTCTCTT AATTCAACGC
CTGGAACAAG TTCGTCACCG AGCTAAACGC AAGGCTAATT ATTGCTTTGC TCTTTTATTT
ATCGATCTCG ATCGCTTTAA AAATATTAAT GATAATTTAG GTCATCCTAT AGGTGATCGG
GTGTTAATTA CGATTGCTTC TAGACTCCAA GAATGCGTTC GTTCTCTGGA TACTGTAGCC
CGTTTGGGTG GGGATGAATT TATTATTTTA CTGGATGAAC TAGAAGAAGA AAAAGAAATT
TTTAAGATTA TTGAACGGAT TGAAAAACAA TTAACAACCC CTATGGTCAT TGAAGGGCAA
ACCCTTTCTT TAACGGCTAG TATTGGCATC GCCTTTAATG ATACCAATCT GTCCAATAGC
GACCTGCTTA GAAATGCTGA TCTTGCCATG TATAGAGTTA AAAACGAAGG AAAAGCGGGT
TATGCTATCT ATCAAAGTGA GATGTATGCA CAGGCTCAAG CGCTTTGGGA ACTTGAAAAT
CATCTAAAAT TAGCGATAGA ACGTCAAGAA TTTCTCCTCT ATTATCAACC GATTTTATCC
CTTAAAACTT TAACGGTGAT CGGATTTGAA GCCTTAATTC GCTGGCAACA TCCCCAACGG
GGGTTAATTT CTCCAGTTCA TTTTATTCCT GTAGCTGAAG AAACCGATCT AATTGTTGCC
ATCGGGGAAT GGGTGTTACA ACAGTCCTGT CAACAGTTAT CCGCTTGGCG AGAAAAATAC
CCTCAAGCTA ATCATTTAAC GATCAATGTT AACCTTTCTA ACCGACAGCT AGAGAAAGAT
AATTTTGTCT ATAAATTAGA TAATGTTCTT CAACAAACTG GATTACCTGC CACTCAATTA
AAATTAGAAA TTACCGAAAC CCTTTTAATG ACCAATTTAG CCGCCGCTAT CGCTACTCTT
TCCCAACTTA AACAACGTAA TATAAATATC AGTATTGATG ATTTTGGGAC AGGATATTCT
TCTTTAAATT ATTTATGTCG TCTGCCGGTT AGTAGTCTAA AAATCGATCG CTCCTTTGTC
GCTAATGTCC ACGAAGATAG TAAAAATTTA CAAATTATTC AAACTATTCT GTCTTTAGGG
GAACAATTAA TGATTGAAGT GATTGCTGAA GGCATCGAAA CTCAAAAGCA TTTGGAACAA
TTACAAGAAT TAGGCTGTCA ATATGGACAA GGTTATCTGT TTTCTAAACC CGTGAATTGT
GAGGCAGCAG AACAACTTAT CTGTGCTGGG TTGTGTTGA
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| Protein sequence | MRQNFKPLKI PPYSLAIICP LLALGVRYLL NWALGNNAPL LIFIIPVIIT AWYGGLLPGI
LSTVISAYLG NYFFIHPTEQ FKILSLPETV RIIIFLSEGI FLSIFFEYYK RLNTKTSQIV
ESLRESEERY RLLVEGIEDY GIFMLDGQGR IISWNLGAER IQGYQSTEII GRHYSIFFTT
TDTSAKVPEK ILQTALKQGR FKGEGWRRRK DGSLFWASIV LSPVFAQNRQ LKGFAKITRD
ISERKQAEVQ KNKLLKDLTD LKLALDQSAI VAVTNSQGII TAVNDQFCQI SGYSKEELIG
KTHRIINSGY HSKKFFQQLW ATISQGKIWR GEICNRSKTG QFYWVATTIV PFLNQNNQPF
QYFAIRFDIT QRKLAEKRLR HEVLHDSLTG LPNRTLLIQR LEQVRHRAKR KANYCFALLF
IDLDRFKNIN DNLGHPIGDR VLITIASRLQ ECVRSLDTVA RLGGDEFIIL LDELEEEKEI
FKIIERIEKQ LTTPMVIEGQ TLSLTASIGI AFNDTNLSNS DLLRNADLAM YRVKNEGKAG
YAIYQSEMYA QAQALWELEN HLKLAIERQE FLLYYQPILS LKTLTVIGFE ALIRWQHPQR
GLISPVHFIP VAEETDLIVA IGEWVLQQSC QQLSAWREKY PQANHLTINV NLSNRQLEKD
NFVYKLDNVL QQTGLPATQL KLEITETLLM TNLAAAIATL SQLKQRNINI SIDDFGTGYS
SLNYLCRLPV SSLKIDRSFV ANVHEDSKNL QIIQTILSLG EQLMIEVIAE GIETQKHLEQ
LQELGCQYGQ GYLFSKPVNC EAAEQLICAG LC
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