| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1027 |
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| Symbol | secF |
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| ID | 7111615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 1131930 |
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| End bp | 1132868 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643479297 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_002376349 |
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| Protein GI | 218438020 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.0198826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTAA ATGTAACTAA ACGACGAGGT TTATGGTGGT CAATTTCTGG TGCAGCGATG
CTCATCAGCC TAATGGCAAT GATTGTCTCT TTTGCTATAA TTAAAACTCC TTTACGTCCT
AGTATAGACT TCGTTGGGGG AACAAGAATA CAGTTAGCTC TTGATTGTTC TATTCCTAAT
AATTGCCAAC AACCTATTTC TACCAGTTCA GTCCAAGAAA TTTTAACAGA ACAAGAGTTA
GGGAATAGTA GTGTTCAAGT TATCGATCAA TATACTCTTT CCATCCGCAC TCAAGACTTA
AATGTTGAAC AACGGACGCA ATTACAAACC GCTTTAAATG AAAAAATCGG CACATTTGAC
CCTGAAACCA TTCAAATTGA TACGGTAGGG CCAACCGTTG GACAAGAACT ATTTACCGCC
GGCATATTGG CCTTATTAGT CTCCTTTTTT GGCATTATCG TTTATCTGAG CTTTCGCTTT
CAATTTGATT ATGCTCTCGT CGCCATATTA GCCTTATTTC ACGATGCCTT TATTACGGCA
GGAGTATTCG CTATTTTGGG GTTAGTCCTT GGGGTTGAAG TTGATAGTTT ATTTTTAGTC
GGACTTTTAA CAATTATCGG TTTTTCAGTC AATGATACTG TTATTATCTA TGACCGAATG
CGGGAAGTTT CCACCCAAAA ACCAGAGTTG TCAATTAATG AGGTAGCTGA TCAAGCCGTC
GATCAAACCT TAACTCGTTC TGTTAATACC ACCTTAACGA CTTTACTTCC TCTATTATCC
ATTTTCTTGT TTGGAGGAAC AACTCTTAAA TATTTCGCTT TAACGTTGAT TATTGGCTTT
ATTTTAGGAG CTTATTCTAG TATTTTTGTC GCTAGTCCTC TTGTCGCTTG GTGGAGAGAA
CGCCAGAATA AAACTCCTGT AGCTAACTCT CAAATTTAA
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| Protein sequence | MKLNVTKRRG LWWSISGAAM LISLMAMIVS FAIIKTPLRP SIDFVGGTRI QLALDCSIPN
NCQQPISTSS VQEILTEQEL GNSSVQVIDQ YTLSIRTQDL NVEQRTQLQT ALNEKIGTFD
PETIQIDTVG PTVGQELFTA GILALLVSFF GIIVYLSFRF QFDYALVAIL ALFHDAFITA
GVFAILGLVL GVEVDSLFLV GLLTIIGFSV NDTVIIYDRM REVSTQKPEL SINEVADQAV
DQTLTRSVNT TLTTLLPLLS IFLFGGTTLK YFALTLIIGF ILGAYSSIFV ASPLVAWWRE
RQNKTPVANS QI
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