| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1025 |
|---|
| Symbol | |
|---|
| ID | 7111613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 1129459 |
|---|
| End bp | 1130460 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643479295 |
|---|
| Product | pentapeptide repeat protein |
|---|
| Protein accession | YP_002376347 |
|---|
| Protein GI | 218438018 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.00638756 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTA AAGACCTGAT TCAACGATAT TCAGATGGAG AAACTAATTT TACTGGCTTA
AAAATGCCCG GAGCCAATTT AAGTAGTGCT GATTTGATTG GAATTGTGCT TAATGAAGCG
GATCTTCATG ATGGCAACCT CATTTTTGCT TATCTTAACC GGGCTAATCT GGCTCATACT
AATTTAGTCA CTACTGATCT CAGTGGAGCG AATTTATCTC AGGCTGATTT AACAGGGGCT
GATCTCCGCA GTGCCATTCT TCATGGAATT ATTTTAGCCG GAGCAATCTT ACAAGAAACA
GACCTAACCT TAGCTCTGTT GATAGATGCT AATCTAATCG GGGCTGATCT CAGAGGAGCA
GACTTAAGTG GCGCTAATTT AAGCGGAGCT TGTTTAAAAG GCGCGAATAT GCGTCAGGAA
AAGAAAAGTT TTAATACCAA TCTACAAGGC GCTAATTTAT TTAAAGCGGA TCTCAGTGGA
GCTAATATGA AAGGGGTAGA TCTCGCTAAA GCAAATTTGA GTGGCGCTAA TTTAACCGAA
GCCAATCTAC GAGATGCGGA TTTACGAAAA GTCGATTTAA CTAACGCTAA TTTAACCAAC
ACAATTCTAT CTGAAGCTAA TTTATCTGAA GCTAATTTAA CCGGAGCGAC TCTAAAAAAA
GCCAATTTAG TCAGAGCGAA AATGATGCAC ACTCAACTGA GTGAAGTTAA TTTTACTGAA
GCCATTATGA CTCATGCGAA TCTCAAGGCA GCCAATCTCA AAGGGGCTAA TTTATCCTTG
ACTCGGATGA ATCACGCCGA TCTCACCAGA GCCAATTTAT CAGGGGCAAT TCTTAAAGAA
GCAGAATTAA TCGAAGTTTT TTTTGCTAGA GCTAATTTGA CGGGGGCTGA TTTACAAGGG
ACTAATTTAA CGAGGGCTGA CTTGATGAGC GCTAATTTGA GCAACGCGAA TTTGACAGGG
GCAATTATGC CCGATGGAAA AGTCTATAAT ACAAAAAGAT AA
|
|---|
| Protein sequence | MKPKDLIQRY SDGETNFTGL KMPGANLSSA DLIGIVLNEA DLHDGNLIFA YLNRANLAHT
NLVTTDLSGA NLSQADLTGA DLRSAILHGI ILAGAILQET DLTLALLIDA NLIGADLRGA
DLSGANLSGA CLKGANMRQE KKSFNTNLQG ANLFKADLSG ANMKGVDLAK ANLSGANLTE
ANLRDADLRK VDLTNANLTN TILSEANLSE ANLTGATLKK ANLVRAKMMH TQLSEVNFTE
AIMTHANLKA ANLKGANLSL TRMNHADLTR ANLSGAILKE AELIEVFFAR ANLTGADLQG
TNLTRADLMS ANLSNANLTG AIMPDGKVYN TKR
|
|---|
| |