| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_1010 |
|---|
| Symbol | |
|---|
| ID | 7111597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 1117434 |
|---|
| End bp | 1118975 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643479279 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_002376332 |
|---|
| Protein GI | 218438003 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.000292042 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCCG AATCAAGACA TCGTCGTTTA TTGGCTAACC GCTATCAACT GACTGAATTA
ATTGGTAGTG GCGCTATGGG ACAAGTATAT CGAGCAGAAG ATAAACTCCT CGGAGGAGTG
ATTGTAGCAG TCAAATTTCT CTCACAAGCA TTACTCAATA AAAAAATGAA AGAGAGATTC
GAGCGAGAAG CGACAATTTC TGCTCTTTTA GGCGAAAAAA GCATTCATAT TGTCAAAGTC
CGAGATTATG GGGTTGATGA AAAAGAAATT CCTTTTTATG TGATGGAATT TTTACAGGGA
GAAAGTCTCA GCGACATTAT TAAATTTCAT CCTTTGCCCC TGTCTCGATT TCTCAACTTA
GCTCGTCAAA TTTGTTTTGG CATGGAATGC GCTCATAAAG GCATTTTATA CCAAGGAGAA
CTCTGTTCAA TTATTCATCG GGATATTAAA CCGAGCAATA TTTTAGTGAC TCAGGATTCC
GCTTTAGGAG AATTAGTGAA AATTCTCGAT TTTGGCATTG CTAAATTAGT TCAATCTGGG
GGAGATCAAA CTCAGTCATT TATGGGAACT CTGGCCTATT GTTCCCCAGA ACAAATGGAA
GGCAAAGAGC TAGATAGTAG CTCAGATATT TATAGTTTGG GCATCATGAT GTATGAAATG
CTCACTGGGG ATATGCCTCT CTTACCGGAA AATTCTTCCT TTGGGGGTTG GTATGAAGTT
CATCACTATG TTTCACCTCA ACCGTTTAAT CCTACCTTAA AAATTCCCCT CGGATTACAA
AATTTAATTC GTAAATGTTT AGAAAAAGCC CCTCAAGATC GACCTCAAAA TATTGGGGAA
ATTTTACAAG CTTTAGAACA AATTGAACTA GCCGCTAAAC CGGTATATAG AGAAGAAAAA
GAGCAACGCT TTAATTTTCC TCCTACTTTA CCCCCCGACA ACAGACCAGA GTTCGGAAGT
CGAGAGCGTA CTATTTCTGT TTCTCTCCCT GCTAAAGAGG TCTGTTTACA AAGTCAATGG
CCCAAGGACA AACCCCAACA AAAAATCGTT TTTCCCCACA TTATGGGCAG TAAAGACGGG
CCTTTTGCCA GTTTATGGGT AATGTTGGAA AAGCCGGATA TTCTCACTAG CATTGCCAGT
ATTCGCTATA ATCAGTTTCT TTTTATTCCT ACTCCCCATC CGATGATTCT TTGGATTACG
GTTTTGTATC ATCGGGAACA TGGCCCCCGT TGGCTTCCCT GTTATCTCGA TTTAAAAACC
CTTCAGGGAC AACAGCTAAC TCGTGCTTTG GGTGAGTTGG GCAATTATTG GATTTTGTTT
TTTGCTTTAG AAGACCCTAA CAAATGTGAG CGGGCAATTA CCGCCTCCAT TGCCCCTACT
CAATGTGAAA GGCTCAAAGA CTGGGGGATG CAAAGTCAGA ATATACGCCC CGGCAAGCCA
CAAATTAGCA AGAGAATGTT AAAACGGGAA TTAGACAAGC TTAAACCCAA AATTATCGCT
AAATTAGAAT CGGGAGTTGA GCAGATTCCC AGTAATGTCT GA
|
|---|
| Protein sequence | MPAESRHRRL LANRYQLTEL IGSGAMGQVY RAEDKLLGGV IVAVKFLSQA LLNKKMKERF
EREATISALL GEKSIHIVKV RDYGVDEKEI PFYVMEFLQG ESLSDIIKFH PLPLSRFLNL
ARQICFGMEC AHKGILYQGE LCSIIHRDIK PSNILVTQDS ALGELVKILD FGIAKLVQSG
GDQTQSFMGT LAYCSPEQME GKELDSSSDI YSLGIMMYEM LTGDMPLLPE NSSFGGWYEV
HHYVSPQPFN PTLKIPLGLQ NLIRKCLEKA PQDRPQNIGE ILQALEQIEL AAKPVYREEK
EQRFNFPPTL PPDNRPEFGS RERTISVSLP AKEVCLQSQW PKDKPQQKIV FPHIMGSKDG
PFASLWVMLE KPDILTSIAS IRYNQFLFIP TPHPMILWIT VLYHREHGPR WLPCYLDLKT
LQGQQLTRAL GELGNYWILF FALEDPNKCE RAITASIAPT QCERLKDWGM QSQNIRPGKP
QISKRMLKRE LDKLKPKIIA KLESGVEQIP SNV
|
|---|
| |