| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0996 |
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| Symbol | |
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| ID | 7111583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 1101631 |
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| End bp | 1103130 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 643479265 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002376318 |
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| Protein GI | 218437989 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.0468556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCAA ATTTTCTATC TCAACTGTTT TCCTCCACTG GAACGATTAA AATTTATGAA
CAAACCTACA AATTACCCCT GTTAAAGAGT AGAGAGTTTT GGCGACTCCA AAAAACGATC
CAAAAGCGAC AGCAATTAAT TCAAGAGAGT CAAGGGTTAA AGGGGGTTAA GTGGCCAAAT
CAGAGTAACT TTGACTCTCA ATTTAAAGAC CTGGAAAACT TAATTAGAGA TTACGATAAA
ATTATTCAAT TTCTCTATCA ATATCAACAA AGTTTTCAAC AGTTTTTTAG TCTTTTATCC
GAAGATATTA AAAGAATTGT CAAGGGTAAA TTTTCTCAAT TATATCAAGC GGAACAGCAA
AGACTAGAAC TCGAAAAAAA ATTCTCCGAA GATTTAAGTT TAGGTCTGAT TTTTAAAACT
CAAAAACAAC AAATATTAAA AAATACGTTG ATTCTTTACC GTTCCGCTCA ACTAATGTTA
AAAAAAATTG AGTTAATTAG TAAAAGTATT GACAAAATTA CCGAGGATCA AAATTTACAG
ATTCAGTCTT TACAGGGAAT TGTTCAACAG TTAACCTCTT ATGCTAAAAT TTATTCTCTT
CAGCAAGAGA TTGATAGACT AGAAACCGAT ATTCAAAAAC TAGCTGATAT AGCGATTAAT
TTTGAACAAA ATTTCTCCAA CTATTTAAGC CCTTTTCAAG GATTAATTAC TCAAATAGTA
AACGTCGATC GGGAACTGTC AGAAATCGTT GAACAAATTA GACTATTAGC AGAAGATATT
ACCGATCAAG ACTTAGGAAA TTTTCAAGAC TCTGATAATT GGTACGAAAC CCTAAGCGAG
TTTTTACTAA AAAGCGATCA GAAACAGGAA AGAATTAGAG AAGCTTTTGA ACAGATTCAA
ACTTTCCCCT ATTTTAATCT AGATCAATTG AGTTTTCCTG AATCTTTATT AGAAGAAACT
TCCCTCATTA AAACTTTAAA TAGGATTCAA CTTGAAGTAG AAAGTAAACT GAATCAATTT
AGTCTTAATC TGAATCCTGA AATGGCCTTT AACCTCGCTA AAAATTATCA TCAAGAAGGG
ATGAAATACT ACCTTAAAAA AGACTATCAT AAAACCCTAA TTCATTTAAC TCAAGCCATT
AACCTTAATC CTTTATATGT TAATGCCTAT TATAATCGAG GGTTAACCTA TTATCAGTTA
AAAGAGTATG ATAAAGCTAG AGAAGATTAT AATCAAGCTT TACGGATTAA TCCTCAATTT
ATTTATGCTT ATAATGGTAG AGGATTCGTC TATTATGAAC TGAAAGAATA TGATAAAGCC
CTAGAAGATT ATCATCAAGC TTTAACGATT AATTCCCAAT TTACCCATGC TTACTACAAT
CGAGGTTTAG TTTATTGCGA CCTTAAAGAG TATGATAAAG CTAGAGAAGA TTATTATAAA
GTTCTTGCCA TTGACCCTCA TTATACAGAC GCTTATAAAA AACTCAAAGA TATTCTGTAA
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| Protein sequence | MKSNFLSQLF SSTGTIKIYE QTYKLPLLKS REFWRLQKTI QKRQQLIQES QGLKGVKWPN
QSNFDSQFKD LENLIRDYDK IIQFLYQYQQ SFQQFFSLLS EDIKRIVKGK FSQLYQAEQQ
RLELEKKFSE DLSLGLIFKT QKQQILKNTL ILYRSAQLML KKIELISKSI DKITEDQNLQ
IQSLQGIVQQ LTSYAKIYSL QQEIDRLETD IQKLADIAIN FEQNFSNYLS PFQGLITQIV
NVDRELSEIV EQIRLLAEDI TDQDLGNFQD SDNWYETLSE FLLKSDQKQE RIREAFEQIQ
TFPYFNLDQL SFPESLLEET SLIKTLNRIQ LEVESKLNQF SLNLNPEMAF NLAKNYHQEG
MKYYLKKDYH KTLIHLTQAI NLNPLYVNAY YNRGLTYYQL KEYDKAREDY NQALRINPQF
IYAYNGRGFV YYELKEYDKA LEDYHQALTI NSQFTHAYYN RGLVYCDLKE YDKAREDYYK
VLAIDPHYTD AYKKLKDIL
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