| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0823 |
|---|
| Symbol | |
|---|
| ID | 7107946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 912476 |
|---|
| End bp | 913366 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643479091 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_002376147 |
|---|
| Protein GI | 218437818 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.0401477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATT TAACTTTATT GACCGTTTAT CGTCCCTTAG AATGCCGTCC AGATAGCTAT
CAAGGCTGGT ACACTCAGGC TAATGTTCTT CTTCAAAGAA AGTTATATAC TGAAGCGTTA
TTAAGTTACG AAAAAGCTTT AGAATATTAT CCTAAAGATT ATTGGGCATG GTACAAAAGA
GGTATGACAT TAGAAGAATT AGGACGTTAT GAAGAGGCAG TCTCTAGCTA TGAAAATGCC
TCCCAAGTTC AACCGAGTAA TTACTGGGCT TGGTATGATC AAGGGTGTGT CTATCTAGAA
GACATAAAAG ACTATCAAAA AGCGATCGAG TGTTTTGATA AAGCGTTAGA AGCTAGTCCT
AATGACTATT GGAGTCATTA TCGCAAAGGG GAAGCTCTCC GATTATGGGG ACACTATGAA
GCGGCGATCG CGTGTTATGA TAAATCTTTA GAAATCCGAG CCAATGACTA TTGGGCTTGG
TATCGTCGGG GTGATGCTCT GCTAAACTGG GGCAGAAAAG AAGAAGCTTT GACGAATTAT
AAAAATGCTC TTGATGCTAA ACCTAATGAT TATTGGGCTT CCTATCAACA AGGGGTAATT
TTACAAGAAT TAGGCAGATT TCAAGAGGCG ATTTCCTGTT ATCAGAATGC CCTAGATATC
GAACCTGATG ACGAATATGG TTGGTATAAT CAAGCCTGTT GCTATGCTAA ATTAGGGAAT
ATTCATGAGG CTATTTATAG CCTAGAAAAA GCCGTTCAAA TTTATCCACC CACCTATTTA
GAATTAGCCC AAAATAATTC AGAACTTGAC TTAATCCGTC AGGATGAACG ATTTTTAAAT
TTAGTAAATA CTTATGAAGT TCAGGAAAGT AATGGAAATG GACATCAATA A
|
|---|
| Protein sequence | MTNLTLLTVY RPLECRPDSY QGWYTQANVL LQRKLYTEAL LSYEKALEYY PKDYWAWYKR
GMTLEELGRY EEAVSSYENA SQVQPSNYWA WYDQGCVYLE DIKDYQKAIE CFDKALEASP
NDYWSHYRKG EALRLWGHYE AAIACYDKSL EIRANDYWAW YRRGDALLNW GRKEEALTNY
KNALDAKPND YWASYQQGVI LQELGRFQEA ISCYQNALDI EPDDEYGWYN QACCYAKLGN
IHEAIYSLEK AVQIYPPTYL ELAQNNSELD LIRQDERFLN LVNTYEVQES NGNGHQ
|
|---|
| |