| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0726 |
|---|
| Symbol | |
|---|
| ID | 7109133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 802109 |
|---|
| End bp | 803647 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643478994 |
|---|
| Product | thymidylate synthase |
|---|
| Protein accession | YP_002376050 |
|---|
| Protein GI | 218437721 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0207] Thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR03283] thymidylate synthase, methanogen type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATTTG TAACAGGAGA ACACACAACA TACTACAAAC CAATTTGTAA ATCGAACCAG
TTGATCTGTG GTTATGGACA CATTGCCTTA ATCACAGGAT GGACTGTGAA ACAAACTTTA
GTTAAACATC TATCTCCCAA AGAATTTGCT GTCATTGGTA ACTTATATAG TCCTACTAGA
GGAATTACTC CTTTAATTCG GAATTTACTG GCTAACCCTC ATGTCCGTTT TGTAGTAATT
CTTAATGCTA CTCAAGAAGA TAAAAATGCT GGAGCTTGTG ATTGCTTATT GGATTTTTTT
AGGAATGGAT TTCAAGAAGG AAAAAGTGAT ACTGGACGTA AATGTTGGCT AATAAACTCT
GAAACTAAGG GGTATATTGA TTTTGAAATA GATGCTAAAG CTTTAGACAT TTTACGGAAT
TCCATAAGAT GGGAAGAAGT AAAAACGATT TCAGAAGCAG TTAGTAGAGT TAAGTTTTTT
TCTCAGAATA AAAATGTAGA AGCCTGGGGA AACCCTTTAG AATTTAAAGA GGTTGTCACT
ATTTCCCATG TTTTACCAGG TTCAAGATAT GGACACCGTA TAGAAGGTCA AACAATAGCT
GAAACTTGGA TAAAAATATT GCATAAAATC AGAAAAACAG GCACTATTAG AAATACTGAA
TATGGAGAAT GGCAGGAATT AATTGATATA ATGGCGATTG TTACAGATGA ACCATCAGAT
TTTTATTTTC CTGAACCAAA CTATTTATCA ATAGAGCGCC AGAATCTTCA AAATTATATT
GAGCAGATGC TGTCTGATCT TTCCTCTCAA GAAGGAGTAG AATATACTTA TGGTAAACGT
CTACGGTCAT GGTTTAAACA AGATCAAATA GAGCAAGTAA TTAAGAAATT AACACTGGAT
ATTAACTCAT CTAGAGCAGT AATGTCTTTA TGGGATGTTC ACGATCATGA AGGAAATGAT
AATCCTCCTT GCCTTAATCA TATTTGGCTT AGAGTTGTAG AAAACGAATT ATCTTTAACA
GCAACTTTTC GTAGTAATGA TATGTTTTCC GCTTGGCCAG CAAATGCGAT GGGATTAAGA
GCATTACAAC AGCATATATT AGATAATATT AATCAGAGAG CATCTTATTC TTTAAAGATG
GGGCCTCTAA TTACTGTTAG TCAAAGCGCA CATATTTATA GTGATTGTTG GGAGTATGCT
GATCGTTTAA TAGATGAACA ATATGCTAAG ATATGTCAAA AAAGAGACTT TAATGATCCG
AGTGGAAGTT TTGTTATCAC TCTACAAAAT AATACAATTA TTGTCGAACA TACAACACCT
GGAACAGGAG AAATTGTCAA TTGTTACACG GGAAAATCTG CCCGAAAGCT TTATCAACAA
ATAGCCTCAA ATTGTCCTAG TCTTCAAGTT GAACACGCGA TGTATTTAGG GACTGAGTTA
CAAAAAGCAG AGATAGCTTT ATCTAATAGT CAAACCTATT TGTATATACA AGATCAACCC
TTATCTATAC TTACTAAAGC TATAAAACCT GTAGGTTAG
|
|---|
| Protein sequence | MTFVTGEHTT YYKPICKSNQ LICGYGHIAL ITGWTVKQTL VKHLSPKEFA VIGNLYSPTR
GITPLIRNLL ANPHVRFVVI LNATQEDKNA GACDCLLDFF RNGFQEGKSD TGRKCWLINS
ETKGYIDFEI DAKALDILRN SIRWEEVKTI SEAVSRVKFF SQNKNVEAWG NPLEFKEVVT
ISHVLPGSRY GHRIEGQTIA ETWIKILHKI RKTGTIRNTE YGEWQELIDI MAIVTDEPSD
FYFPEPNYLS IERQNLQNYI EQMLSDLSSQ EGVEYTYGKR LRSWFKQDQI EQVIKKLTLD
INSSRAVMSL WDVHDHEGND NPPCLNHIWL RVVENELSLT ATFRSNDMFS AWPANAMGLR
ALQQHILDNI NQRASYSLKM GPLITVSQSA HIYSDCWEYA DRLIDEQYAK ICQKRDFNDP
SGSFVITLQN NTIIVEHTTP GTGEIVNCYT GKSARKLYQQ IASNCPSLQV EHAMYLGTEL
QKAEIALSNS QTYLYIQDQP LSILTKAIKP VG
|
|---|
| |