| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0717 |
|---|
| Symbol | |
|---|
| ID | 7110843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 790604 |
|---|
| End bp | 794650 |
|---|
| Gene Length | 4047 bp |
|---|
| Protein Length | 1348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643478985 |
|---|
| Product | WD-40 repeat protein |
|---|
| Protein accession | YP_002376041 |
|---|
| Protein GI | 218437712 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.635775 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAG TTTTTAACGG GTTTATCTCT TACGGACGTG CAGACAGTAA AGCTTTTGCC
GTAGCACTGC ACCAGAAACT TACTAATGAA GGCTTAAAAA TTTGGTTTGA TCAAAATGAT
ATTCCTTTAG CCGTAGATTT TCAAGAACAA ATCAACGATG GCATCGAAAA AACAGATAAT
TTTATTTTTA TTATTTCTCC TCATTCCGTT AATTCCCCTT ATTGTCTCAA AGAAATTGAA
CTAGCCCTTA AATATCATAA ACGCATTATT CCCCTACTTC ATGTAGAGCA AATTACCCAA
CAAACATGGC TCAACAGAAA TCCTAACGGC ACAGAGGAAC AATGGCAAAC CTATCAGGCT
AAAGGACTAC ACACAAGTAT AATCAATATG CACCCAGTAA TTAGTAAACT CAACTGGGTG
TATTTTCGAG AAGAAATAGA TGAATTTGAA ACTAATTTTC AAAAATTACT CCATGTTTTT
CAACAGCATC AAGACTACAT TCAACAGCAT ACCCAGTTAT TGCTGAAAGC TTTAAAATGG
GAAAAACATC AAAAACAACA TCAATACTTA TTAAGTGGAC AAGAACGAAT CGAAGCAGAA
ACCTGGTTAA AAACTGAATT TATTAATGAA CAGCGCCCTT GTACACCGAC GGATTTACAC
TGTGAATTTA TTTGTGAAAG TATCAAAAAT GCTAAAAATT TAATGTCTGA GGTCTTTATA
TGTTATTCAG ACTTAGACAA ATCTATCATG ATTCAACTGC GTCAATCTTT GATGCGTCAT
AGTATTACTG TATGGACTAA CCAGACTGAT ATTCAAAGTG GGACTCAATT TGAACAGGAA
ATAAAACAGG GGGTAGAACA GTCAGATAAT ATTATCTATC TTATTTCATC TAATGCTCTG
GCTTCAGAAT ATTGTCAGAT GGAATTAGAT TATGCTCTAA GTTATCATAA AAGAATTATT
CCTCTATTAA TTGAGTCGAT AAATTTAGAT AAAATTCCTC CTCAAATTTT AGGATTACAA
TTTATTGATT TATCCGAGAG TAGGACGGAA GATTATTATA ATCAAACTAT TGATAAACTC
CTGAAAGCTC TTAAACAAGA TGCTCAGTAT TACGAAGATC ATAAATTAAT TTTAACTAAA
GCCATTAAAT GGCAACGACA ACATCATAAT CCTAGTCTTT TATTGCGAGG ATATAACTTG
AGTCATGCTC AAGCTTGGTT AAAAGTCGGT AACACTAAAA CTCAACATCA ACCTATTCTC
CTACAAGAAG ACTTTATTAA TGCCAGTTTA CTACAGCCTC CCCTTGAATC TTTAGATGTT
TTTATTTCTT ATTCTAGGGT TGATGCTGAT TTTGCGCGTA AGTTAAATGA TGCCCTTCAA
GAAATTGGTA AAACGACTTG GTTTGATCAA GAAAGTATTG CTTCTGGAGA GGATTTTAAA
CAGGAAATTT ATCGCGGAAT TGAAAGTTCA GATAATTTTG TTTTTATTAT TAGTCCTAAA
TCGATCAATT CTCCCTATTG TGCTGATGAA GTTCAATATG CTCAAAAGTT AAATAAACGG
ATCATACCTA TTTTATATCG AGAGGTTTTA TCAAATCAAT TACATCCCGC TTTAGCCAAA
GTCCAATGGA TTAATTTTAA TCAGTATGGC GGTAATTTTG CTGCTAATTT TAATGAATTA
GTGAGAACTC TAGACAGCGA TCGAGATCAT GTGAGAAATC ATACTAAATG GTCACAACGG
GCTAAAGAGT GGCAAACTCA ACAAGAAAGT GAGGATTTAC TGTTAAGAGC CAGTGAATTT
ATCTTAGCAA AAAATTGGTT AAAAGAAGCA GAAGCTGAAA AAAAAGAACC TTTTCCGACT
CAACTCCAAA AAGATTTTAT TGCTCGTAGT AAAGCCGCTA TAGATGCAGA ATCTAAACGG
GCAAAACGCC GAGAAATGCG GTTACGAATG ATGTTAGGAT TAATGACTAT GGGGTTTATT
AGTGCAGTTG GATTAGGTTG GTTTGCCTTT TCTCAAAGAA ATTTAGCCGT TAAAGCTTTG
AGTAATTCTT CACAAGCTCT CAGATTTGCT AATAAAGAAT TTGATGGACT TCTCCTAGCA
ATTAAAACCG GCAAATTACT TCAACAACTC CCGATTATAA ATAATCATGA TGCAGTAGTA
GCGCTTCAAG GTGCAATCAA TGATGTGAGA GAATTTAATC GTTTATCAGC CGGTCATGGG
GCAGTTTTTA GTGTTAGTTA TCATGGTAAT TATATAGCTA CTGCTCATAA TGATGGAACG
GTTATCCTTT GGAATGAAAA TGGAAGTCAA TATAAACAGT TTAAAGCTCA TGATGGGTTA
GTTTGGGGGA TTAGTTTTAG TCCCGATGGC CGCTATTTGG CGAGTGTATC GGCAGATAAA
ACCGCTAAAC TTTGGACAGA AAACGGTCAA TTAGTTAAAA TATTCCAAAC CGGAAAAGAA
GGTTATGGAG AAGTCTCAGA TGTTAGCTTT AGTCCGGATG GGGAAATTAT TGCAGTTACT
AATGGGAATA AAACAGTAAC CCTTTATCGT CTTAATGGTC AACTTTTTAA AACTTTGGAA
GGACATAATG GCCAAGTTTG GAGTGTTAAA TTTAGTCCTG ATAATAAAAT GTTAGCGTCT
AGTAGTGCTG ATGGAACAAT TAAATTATGG GACAAAGAAG GGAAACTGTT AAAAACCTTG
GAAGGACATC AAGATTGGAT TTGGACTGTC AATTTTAGTC CCGATAGTCA GCGTCTTGTT
TCTGGTAGTA AAGATGGAAC AATTAAGTTA TGGAATTTGA AAGACAATAA ACCTCTCAGT
TTAAGCTGGA AGGGCGATAA TGACGGAGTC TTAAGTATTA ATTTTAGTCC CGATGGTCAA
GGGATTATTT CTAGTGGAGT GGATAAAAAA GTTAAAATTT GGAATCTTAA AGGAGAACAA
CTGGAAACCT TTGAAGGTCA TGAAAATTGG ATCTGGGATA CTAAAATCAT TTCTAAAGGT
CAAAATCAAA CTATTGCTAG CGCGAGTAAA GATGGAACTG TTAGACTATG GCAGTGGCAG
CAAAATGAGC AAAATTTAAA ACAACTATTA CTTAAAGACA AAGGAACAGA TATTGCTTTT
AGTCCCAATG GTCAAATAGT GGCTATTGCT AACATTGATA ACACGGTTCA ACTTTGGAAT
GGAAAAAAAT TAAGGACTTT TTCAGGTCAT GAGGGTAAAG TTTGGGGTGT CAATTTTAGT
CCAGATGGTC AAACTCTGGC TAGTGTCGGG GAAGATAAAT TGATAAAATT ATGGGATTTA
AAAAATCATC AATCACGAAC TCTTAAAGGT CATCAGGATA AAGTATGGTC AGTAAAATTT
AGTCCTGATG GGAAAATAAT TGCCTCTGCT AGTAGTGACA GAACAGTTAA ACTTTGGAGT
TTTGAAGGTC AGCTTTTAAA TACATTAAAG GAGAATTTGG GAGAAATTCA TGCTGTTAGT
TTTAGTCCCG ATGGAACATT AATTGCTCTT GGGGGTTTTA ATGGACAAGT TGCTTTATTT
TCCCCTCAAG GTCAACTCCT GAGAAAATTT GATGCCCATC CTGACTCGAT TTTTGAGCTT
TCTTTTAGTC CTAATGGCAA AATGTTGGCA ACGGCAAGCG GAGATAAAAC AGTAAAACTT
TGGAATTTAC AAGGCCAAGT CTTAGAAACT TTAATCGGTC ATAGATCTTC TATTTATCGA
GTCAAGTTTA GTCCTGATGG TAAATTTATT GTGACCGCCA GTGCCGATAA TACGGCTAAA
ATCTGGAGTT TAGATGGGCG AGTTGTCCAA ACTTTTACCA CACATTCCGC CGCCGTTAAT
GGCATTGATA TTAGTCCTGA TGGAAAAACT TTAGCTACAG TGAGTAGTGA TAAATCTGCT
ATTTTATATT CTTTAGACTT GGCAAAACTT AACAGTTTGG CTAATCTTAA TCTAGATAAG
CTTATGAATT TTGCTTGTCA TTGGGCGGGA GATTATCTGA AACATAATCA GAATGTTGAA
CAGAGCGATC GCCATCTTTG CCCCTGA
|
|---|
| Protein sequence | MSEVFNGFIS YGRADSKAFA VALHQKLTNE GLKIWFDQND IPLAVDFQEQ INDGIEKTDN
FIFIISPHSV NSPYCLKEIE LALKYHKRII PLLHVEQITQ QTWLNRNPNG TEEQWQTYQA
KGLHTSIINM HPVISKLNWV YFREEIDEFE TNFQKLLHVF QQHQDYIQQH TQLLLKALKW
EKHQKQHQYL LSGQERIEAE TWLKTEFINE QRPCTPTDLH CEFICESIKN AKNLMSEVFI
CYSDLDKSIM IQLRQSLMRH SITVWTNQTD IQSGTQFEQE IKQGVEQSDN IIYLISSNAL
ASEYCQMELD YALSYHKRII PLLIESINLD KIPPQILGLQ FIDLSESRTE DYYNQTIDKL
LKALKQDAQY YEDHKLILTK AIKWQRQHHN PSLLLRGYNL SHAQAWLKVG NTKTQHQPIL
LQEDFINASL LQPPLESLDV FISYSRVDAD FARKLNDALQ EIGKTTWFDQ ESIASGEDFK
QEIYRGIESS DNFVFIISPK SINSPYCADE VQYAQKLNKR IIPILYREVL SNQLHPALAK
VQWINFNQYG GNFAANFNEL VRTLDSDRDH VRNHTKWSQR AKEWQTQQES EDLLLRASEF
ILAKNWLKEA EAEKKEPFPT QLQKDFIARS KAAIDAESKR AKRREMRLRM MLGLMTMGFI
SAVGLGWFAF SQRNLAVKAL SNSSQALRFA NKEFDGLLLA IKTGKLLQQL PIINNHDAVV
ALQGAINDVR EFNRLSAGHG AVFSVSYHGN YIATAHNDGT VILWNENGSQ YKQFKAHDGL
VWGISFSPDG RYLASVSADK TAKLWTENGQ LVKIFQTGKE GYGEVSDVSF SPDGEIIAVT
NGNKTVTLYR LNGQLFKTLE GHNGQVWSVK FSPDNKMLAS SSADGTIKLW DKEGKLLKTL
EGHQDWIWTV NFSPDSQRLV SGSKDGTIKL WNLKDNKPLS LSWKGDNDGV LSINFSPDGQ
GIISSGVDKK VKIWNLKGEQ LETFEGHENW IWDTKIISKG QNQTIASASK DGTVRLWQWQ
QNEQNLKQLL LKDKGTDIAF SPNGQIVAIA NIDNTVQLWN GKKLRTFSGH EGKVWGVNFS
PDGQTLASVG EDKLIKLWDL KNHQSRTLKG HQDKVWSVKF SPDGKIIASA SSDRTVKLWS
FEGQLLNTLK ENLGEIHAVS FSPDGTLIAL GGFNGQVALF SPQGQLLRKF DAHPDSIFEL
SFSPNGKMLA TASGDKTVKL WNLQGQVLET LIGHRSSIYR VKFSPDGKFI VTASADNTAK
IWSLDGRVVQ TFTTHSAAVN GIDISPDGKT LATVSSDKSA ILYSLDLAKL NSLANLNLDK
LMNFACHWAG DYLKHNQNVE QSDRHLCP
|
|---|
| |