Gene PCC7424_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0620 
Symbol 
ID7108726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp684054 
End bp684728 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content43% 
IMG OID643478889 
ProductSNARE associated Golgi protein 
Protein accessionYP_002375948 
Protein GI218437619 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTAAAAG CGAAAAGGAA CATTATTCTA CTGCTCCTAA TCTGTATTGT TGTTACAGCG 
ATCGGAATTT ACTTTCTGGG GGCACTCAAG CCAGAACAAA TACAGTTATG GCTCACAAAA 
ATGGGGATTT GGGCCCCGAT TATTTACATT ATTCTTTACA CTATAGGAAC TATTTTAATT 
TTACCTTCTA CCCCCCTTAA TTTAAGTGGC GGTGCTTTAT TTGGGGTAGG GTGGGGAACG 
TTATGGACGA CGGTGGCGGC TCTTGTGGCG GCGGTTGTTT CTTTTGGTTT TACTCGCACG 
ATTGGACGAA ATTATATTGC TCAAAAATTA GCCGGGCGCT GGGAAGCGAT TGATGCAGAA 
ATGCGTCAGG GAGGCTTATT TTATATGTTC GCTATTCGAT TACTGCCGAT TATTCCCTAT 
GGGATTGTCA ATTTTGCTGC CGGGTTAACT TCGATTCGGT TTCGAGATTA TTTAATCGGG 
ACAACCTTAG GAACAGTGCC CGGAATACTC CCTTTTGTGA TGATGGGAGC CGGTTTACAA 
GCGCTCAGTA GTGGGAATAT TTTTCCCCTT ACGGTAGCAT TTACTTTAAC TGGAATCCTG 
GTCGGGGTGG CTACTTGGTA TCGTCGTCGT CGTCAATTTC CCTCTCAACT TCAGAATAAA 
TCTAATAAAA AATAA
 
Protein sequence
MLKAKRNIIL LLLICIVVTA IGIYFLGALK PEQIQLWLTK MGIWAPIIYI ILYTIGTILI 
LPSTPLNLSG GALFGVGWGT LWTTVAALVA AVVSFGFTRT IGRNYIAQKL AGRWEAIDAE 
MRQGGLFYMF AIRLLPIIPY GIVNFAAGLT SIRFRDYLIG TTLGTVPGIL PFVMMGAGLQ 
ALSSGNIFPL TVAFTLTGIL VGVATWYRRR RQFPSQLQNK SNKK