| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0578 |
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| Symbol | |
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| ID | 7108684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | - |
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| Start bp | 635008 |
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| End bp | 636387 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643478848 |
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| Product | photosystem II 44 kDa subunit reaction center protein |
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| Protein accession | YP_002375907 |
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| Protein GI | 218437578 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01153] photosystem II 44 kDa subunit reaction center protein (also called P6 protein, CP43), bacterial and chloroplast
[TIGR03041] chlorophyll a/b binding light-harvesting protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGTAACGC TCTCTAATAC TTCTGTTGGC AGTCGTGACT TTAACTCTAC CGGGTTTGCT
TGGTGGGCAG GTAATGCTCG TCTAATCAAC CTCTCCGGTA AGTTACTCGG CGCTCACGTT
GCTCATGCTG GTTTAATTGT TTTCTGGGCG GGTGCTATGA CCCTATTTGA AGTAGCACAC
TTTATCCCTG AAAAGCCCAT GTACGAGCAG GGTTTAATTC TTCTCCCTCA CCTAGCCACT
CTAGGTTGGG GTGTTGGCCC TGCCGGTGAA GTCATTGATA CTTTCCCTTA CTTCGTCGTT
GGAGTTTTAC ACTTAATCTC TTCTGCTGTT CTCGGTTTCG GTGGAATTTA CCACGCTTTA
AGAGGCCCTG AAATTTTAGA AGAATATTCC AGTTTCTTCG GTTATGACTG GAAAGATAAA
AACCAAATGA CCAACATTAT TGGTTATCAC CTAATTCTTT TAGGATGTGG TGCTTTACTG
TTGGTGTTTA AAGCCATGTT CTTTGGCGGT GTATATGATA CCTGGGCCCC CGGTGGGGGA
GATGTCCGGG TGATCACCAA CCCCACTCTC AACCCTGCGG TGATCTTTGG CTATTTGACC
AAAGCTCCTT TCGGTGGAGA AGGTTGGATC ATCAGCGTCA ACAACATGGA AGATATTATC
GGTGGACACA TTTGGGTTGG TTTAATTTGT ATTGCTGGCG GTATCTGGCA CATCTTAACC
AAGCCTTTCG GTTGGGCCCG TCGTGCTTTC ATCTGGTCTG GTGAAGCTTA TCTTTCCTAC
AGCTTAGGCG CGTTGTCCTT AATGGGCTTC ATCGCTTCCG TTTATGTTTG GTTTAACAAC
ACTGCTTATC CTAGTGAGTT CTATGGCCCT ACTGGGATGG AAGCATCTCA ATCTCAAGCG
TTTACCTTCT TGGTTCGTGA CCAACGTTTA GGAGCTAACA TCGGTTCTGC TCAAGGTCCT
ACTGGGTTAG GTAAATACTT AATGCGTTCT CCTACTGGGG AAATCATCTT CGGTGGTGAA
ACCATGCGTT TCTGGGACTT CCGTGGCCCT TGGTTAGAGC CTCTTCGTGG TCCTAATGGT
CTTGACCTCG ATAAATTAAG AAACGACGTT CAACCTTGGC AAATTCGCCG CGCTGCTGAG
TACATGACTC ACGCTCCTTT AGGGTCTTTA AACTCTGTGG GTGGAGTTAT CACTGACGTT
AACTCTTTCA ACTATGTATC TCCCCGCGCT TGGTTGGCAA CCTCTCACTT TACTCTCGCT
TTCTTCTTCC TAGTTGGGCA CTTGTGGCAC GCTGGACGCG CCCGCGCTGC TGCGGCTGGG
TTCGAGAAAG GGATCGATCG TGAGACTGAA CCCGTTCTCT CTATGCCTGA TCTTGACTAA
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| Protein sequence | MVTLSNTSVG SRDFNSTGFA WWAGNARLIN LSGKLLGAHV AHAGLIVFWA GAMTLFEVAH
FIPEKPMYEQ GLILLPHLAT LGWGVGPAGE VIDTFPYFVV GVLHLISSAV LGFGGIYHAL
RGPEILEEYS SFFGYDWKDK NQMTNIIGYH LILLGCGALL LVFKAMFFGG VYDTWAPGGG
DVRVITNPTL NPAVIFGYLT KAPFGGEGWI ISVNNMEDII GGHIWVGLIC IAGGIWHILT
KPFGWARRAF IWSGEAYLSY SLGALSLMGF IASVYVWFNN TAYPSEFYGP TGMEASQSQA
FTFLVRDQRL GANIGSAQGP TGLGKYLMRS PTGEIIFGGE TMRFWDFRGP WLEPLRGPNG
LDLDKLRNDV QPWQIRRAAE YMTHAPLGSL NSVGGVITDV NSFNYVSPRA WLATSHFTLA
FFFLVGHLWH AGRARAAAAG FEKGIDRETE PVLSMPDLD
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