Gene PCC7424_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0475 
Symbol 
ID7107420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp526966 
End bp527997 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content42% 
IMG OID643478747 
Producthistone deacetylase superfamily 
Protein accessionYP_002375808 
Protein GI218437479 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAACTG TTTATAGCCC AGATCATCTC TATCAAAATG CCCAATTTGA ACTCATTGAT 
GGACAACTAT TACCCCCAGT CGATACCCCT AAACGAGTTG AGGCAGTTTT AGAAAAAATT
GAGGCGATAA AATTGGGGGA AGTGTTACCG GCTCAAGAGT TTGGGTTAGA CCCCATTTTA
CGGGTTCATG AGGACTCTTT TGTTAATTTT CTGCAAAATG CTTGGTCAGA CTGGGTGAAA
GAATACGGCG AAAAAGAAGC CCTTCCTCTC AATTGGCCGG CACGAACTCT ACGTCAGGAT
AAAATACCTG AAGCGATCGA TGGTAAATTA GGATATTATT CTTTTGATGC CGGTACACCT
ATTACTGCCG GAACTTGGCG GGCGGCTAAG GCTTCCGCTA ATGTGGCTTT AACTGCCCAA
CAGCTATTAA AAACAGGAGA AAAAACGGTT TTTGCCCTCT GTCGTCCTCC GGGACACCAT
GCCGCCAAAA GTCTTTATGG GGGTTACTGC TTTCTCAATA ATGCGGCTAT TGCGACTCAA
GCTTTACTCG ATGCAGGGGC GCAGCGCGTG GGCATTCTGG ATGTGGACTA TCATCACGGC
AATGGAACTC AAGACATTTT TTATCATCGA AATGATGTTT TATTTGTTTC CCTACACGCT
GACCCTCGTT TAGATTATCC TTTTTATTTA GGCTATGAAG ATGAAACGGG TATAGGTCAA
GGTGAAGGGT TTAATTTTAA TTATCCCTTA CCTTGGGGAA TTCGTTGGCC TGAGTATTGT
CAACGGCTTA AACAAGGAAT TGATCTGATG ATTAATTATA GTCCTGATGT CTTGGTGGTT
TCTTTAGGCG TAGATACCTA CGAACATGAT CCGATCGCTA AATTTGCTTT AACAACAGAA
GATTACCTAT CTTTAGGAAA AATGCTCGCC TCCATTAACA AACCGACTTT ATGGGTAATG
GAAGGAGGTT ATGCTGTACC AGAGATAGGA AATCATATTA CTAATGTTTT AATCGGATTT
GAGGATAATT GA
 
Protein sequence
MLTVYSPDHL YQNAQFELID GQLLPPVDTP KRVEAVLEKI EAIKLGEVLP AQEFGLDPIL 
RVHEDSFVNF LQNAWSDWVK EYGEKEALPL NWPARTLRQD KIPEAIDGKL GYYSFDAGTP
ITAGTWRAAK ASANVALTAQ QLLKTGEKTV FALCRPPGHH AAKSLYGGYC FLNNAAIATQ
ALLDAGAQRV GILDVDYHHG NGTQDIFYHR NDVLFVSLHA DPRLDYPFYL GYEDETGIGQ
GEGFNFNYPL PWGIRWPEYC QRLKQGIDLM INYSPDVLVV SLGVDTYEHD PIAKFALTTE
DYLSLGKMLA SINKPTLWVM EGGYAVPEIG NHITNVLIGF EDN