| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0469 |
|---|
| Symbol | |
|---|
| ID | 7107414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 518018 |
|---|
| End bp | 518869 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643478742 |
|---|
| Product | photosystem I assembly BtpA |
|---|
| Protein accession | YP_002375803 |
|---|
| Protein GI | 218437474 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0434] Predicted TIM-barrel enzyme |
|---|
| TIGRFAM ID | [TIGR00259] membrane complex biogenesis protein, BtpA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACTTAA ATCAACTCTT TAATACAGCA AATCCTATCA TCGGCGTTGT TCATTTGTTG
CCATTGCCCA CTTCTGCCCG TTGGGGAGGG AATTTGACCG CAGTGATCGA AAGGGCAGAA
CAGGAAGCAA CCGCTTTGGC GGCGGGTGGA GTAGACGGAA TTATTGTCGA AAATTTTTTT
GATGCTCCTT TTGCAAAAGA TCACGTAGAC CCGGCTGTGG TGAGTGCGAT GACTCTGATT
GTCGATCGTC TCAAAAACTT GGTGGTTTTA CCAGTAGGTT TAAATGTATT ACGGAATGAT
GGCAGGAGTG CTATGGCGAT CGCTGCCTGT GTTAAAGCTC AATTTATTCG GGTTAATGTC
TTAACCGGCA TTATGGCTAC GGATCAAGGG ATGATCGAAG GACAAGCGCA CCAACTCCTG
CGCTATCGTC GAGAATTAGG CAGTGATATC GCTATTTTAG CGGATGTTTT GGTCAAACAC
GCCCTTCCTT TAGGGAATGC TAACCTGACT ACGGTAGTAC AAGATACAAT TGAAAGAGGG
TTAGCCGATG GGGTCATTTT ATCAGGATGG TCAACTGGGA ATGCTCCCTC TTTTGAAGAT
TTAGAATTAG CGACAACCGC AGCCAAAGGA ACGCCTGTAT TGATCGGCAG TGGGGCAACC
TGGGAAAACA TTGGTCAATT GATGAAGGCC GCAGATGGGG TGATCGTGGC CAGTTCCCTC
AAACGTCATG GTAATATTAA TGAGCCGATC GATCCGATTC GGGTTTCTCA ATTTGTGGAA
GCCGCGCGAG AAGTGAGTTT AGCTAAAGAA ACATCACAAT CTATCTCTTC TATGAAACTG
CCTCAAAAAT AA
|
|---|
| Protein sequence | MNLNQLFNTA NPIIGVVHLL PLPTSARWGG NLTAVIERAE QEATALAAGG VDGIIVENFF
DAPFAKDHVD PAVVSAMTLI VDRLKNLVVL PVGLNVLRND GRSAMAIAAC VKAQFIRVNV
LTGIMATDQG MIEGQAHQLL RYRRELGSDI AILADVLVKH ALPLGNANLT TVVQDTIERG
LADGVILSGW STGNAPSFED LELATTAAKG TPVLIGSGAT WENIGQLMKA ADGVIVASSL
KRHGNINEPI DPIRVSQFVE AAREVSLAKE TSQSISSMKL PQK
|
|---|
| |