| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0411 |
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| Symbol | |
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| ID | 7109268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 455151 |
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| End bp | 456665 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643478684 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002375745 |
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| Protein GI | 218437416 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAATT CACTCAACGG ACGCACAGAA GACTATTATA ATCTTGAATC TGAAGTTATT
CAATTTCCTG AAGTTCGCTC ATCAGACAAT GATTGGTCTT ATTCAACTAA AGAATTACTA
GATAGTTTAC CTAAAGTTTG GACAAGAGGA TTACTATACT TTTTAGTTAT TTTTATTACT
ATCGCTTTAC CTTGGGCGAT GTTTTCAAAA ATTGATGAGA CGGGGAAAGC ACAAGGTCAA
CTCGAACCGA AAGGTAAAAC AATTCGATTA GATGCTCCTG TCTCAGGAAC GGTTGCTACG
ATTAAAGTTA AAGAAGGAGA AAAGGTCAAA GTTGGACAAA CTTTAGTCGA GTTAGAATCT
GACTTGGTGA ACGCGGATCT TCAATTACAA AAAAATAAAT TAGAAGGACA AGAAAATCGG
TTACATCAGT TAGATATTCT TAAAAATCAA CTTCAGATCG TTCTTCAAAC TCAAACCCAA
CAAAACCAAG CTCAAAAATT AGAAAAATTA GCTCAAGTTA ATCAAGCTAA ACAAGAGCTA
GAAGTGCTGC AAAATACGTA CCATTTACAA CAACAAGAAA AATTAGCTCA AGTTAATCAA
GCTAAACAAG ATTTACAACA TAGTCAAGTC GATAATCATC TCGCAGGAAT TGGTTTAAAA
ACAGCCGAAC ACGAAGCGCA GCGTTACCGA GAAGCGGCTG AAGAAGGAAT TGTTTCTCAA
ATTCAAATTG TTGAAAAGGA GGATGTTATC CAAGAAAGAA CCAGAGTTTA TGAGCAAACT
AAATCAGACA TTGAGCAAGC AAAACTCCGT TTATCTGAGC AACAAAGTAT CTATGAACGA
ACAATCAAAC AAACTAAATC AGATATTGAG AAATCTAAAT TACGGCTAAA AGAACAAGAA
AATAGTTATA ACAGTTTAAT TCAATCTGGA GAAATAGCTA TCTTAAAAGT TAAAGAGCAA
CTGAAAAATG TAGAAACAGA TGTAACTAGC TTAAAATCAG AAATTAAGCA AACAAAATCT
CAAATCCAAT CTTTAGAGTT TCAGTTATCT CAACGAGTGA TAAAATCCCC AGTAGAAGGA
ACAATTTTTG ACTTAGCTGT TGAGCGAGAA AAATCAGTTT TACAATCGGG TAACAAAATT
ATTGAAATTG CTCCTCAAGG AACAAAGCTA GTTCTTCGGG CAGAAATGGC TACTCAAGAA
AGTGGTTTTT TAGAAAAAGG AATGTTAGTG AAAATGAAAT TTGATGCTTA TCCTTTTCAG
GATTATGGTA TAATAGAAGG GAAGTTATCT CAAGTTTCAC CTACTACAAA AAAAATCGAA
ACTTCAGACG GGGAAACATC AGCATATGAG TTAGAAATAG AACTCGATCA AACCTGTATT
CCTTCTTCAA AAGAATGTAT TCCTTTACGT CCTGGTGATA CAGCAACAGC AGAAGTTGTT
GTTCGTCAGC GCCGCCTAAT TGATTTTATT CTCGATCCTT TCAAAAAATT GAATTCGGGA
GGATTAGAAC TGTAA
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| Protein sequence | MPNSLNGRTE DYYNLESEVI QFPEVRSSDN DWSYSTKELL DSLPKVWTRG LLYFLVIFIT
IALPWAMFSK IDETGKAQGQ LEPKGKTIRL DAPVSGTVAT IKVKEGEKVK VGQTLVELES
DLVNADLQLQ KNKLEGQENR LHQLDILKNQ LQIVLQTQTQ QNQAQKLEKL AQVNQAKQEL
EVLQNTYHLQ QQEKLAQVNQ AKQDLQHSQV DNHLAGIGLK TAEHEAQRYR EAAEEGIVSQ
IQIVEKEDVI QERTRVYEQT KSDIEQAKLR LSEQQSIYER TIKQTKSDIE KSKLRLKEQE
NSYNSLIQSG EIAILKVKEQ LKNVETDVTS LKSEIKQTKS QIQSLEFQLS QRVIKSPVEG
TIFDLAVERE KSVLQSGNKI IEIAPQGTKL VLRAEMATQE SGFLEKGMLV KMKFDAYPFQ
DYGIIEGKLS QVSPTTKKIE TSDGETSAYE LEIELDQTCI PSSKECIPLR PGDTATAEVV
VRQRRLIDFI LDPFKKLNSG GLEL
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