Gene PCC7424_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0402 
SymbolpsaB 
ID7109259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp441791 
End bp444019 
Gene Length2229 bp 
Protein Length742 aa 
Translation table11 
GC content50% 
IMG OID643478676 
Productphotosystem I P700 chlorophyll a apoprotein A2 
Protein accessionYP_002375737 
Protein GI218437408 
COG category 
COG ID 
TIGRFAM ID[TIGR01336] photosystem I core protein PsaB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.671863 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTA AATTTCCAAA ATTTAGCCAG GACTTAGCCC AAGACCCGAC AACTCGTCGG 
ATCTGGTATG GGATAGCCAC AGCCCACGAC TTTGAAAGTC ATGATGGAAT GACCGAGGAA
AATCTCTATC AAAAGATTTT CGCCTCTCAT TTCGGACACA TCGCCATCAT CTTTTTGTGG
ACATCCGGCA CCCTATTCCA CGTAGCCTGG CAAGGTAACT TCGAGCAGTG GATTAAAGAC
CCAGTTAATA TCCGTCCGAT AGCCCACGCA ATTTGGGATC CCCACTTCGG ACAACCGGCA
GTAGATGCGT TTACCCAAGC CGGAGCATCA AACCCAGTCA ACATAGCCTA CTCAGGGGTG
TATCACTGGT TCTACACCAT CGGAATGACC AATAACCAAG ATTTATATCA AGGTGCGGTA
TTCCTATTGA TTCTGTCGTC ATTGTTCCTA TTTGCGGGCT GGCTGCACCT TCAACCGAAG
TTCCGCCCCA GTCTAGCATG GTTCAAAAAT GCAGAATCCC GGATGAACCA CCACCTAGCC
GGGTTATTTG GGGTAAGTTC CTTAGCCTGG GCAGGACACT TAATCCACGT CGCTATCCCT
GAATCTCGGG GTCAGCACGT CGGTTGGGAT AACTTCCTGT CTGTGCGTCC TCACCCAGCC
GGATTGATGC CGTTCTTCAC CGGAAATTGG GGAGTCTATG CCCAAAACCC AGACACGGCT
AATCATGTGT TTGGCACATC TCAAGGGGCA GGAACAGCCA TCCTCACCTT CTTAGGTGGA
TTCCATCCTC AAACCGAATC CCTGTGGTTG ACGGACATGG CTCACCACCA TTTGGCGATC
GCGGTAATCT TCATTATCGC CGGGCATATG TACCGCACCA ACTGGGGTAT CGGTCACAGC
ATGAAGGAAA TCCTCAATGC TCACAATCCC CCCGAAGGAA CACCCTTTGG CGGAGTATTA
GGAGCAGGAC ACAAGGGAAT TTATGACACC TACAACAACT CGTTGCACTT CCAATTAGGG
ATACACTTAG CCGCATTGGG TGTAGTGACC TCCTTGGTAG CGCAACATAT GTACTCGATG
CCGCCTTATG CGTTCCTGGC TAAGGATTAC ACCACCCAAG CCGCCTTGTA TACTCACCAC
CAATACATTG CCGGATTCTT GATGGTGGGG GCTTTTGCTC ACGGAGCGAT CTTCTGGGTC
AGAGATTATG ATCCCGAAGC CAACAAAAAT AATGTGTTGG CGCGGATGCT AGAGCATAAA
GAAGCGATCA TCTCCCACTT AAGCTGGGTA TCGTTATTCC TCGGATTCCA CACCCTTGGA
CTCTATGTCC ACAATGATGT GGTAGTCGCC TTTGGAACAC CAGAAAAACA AATTTTAATT
GAGCCTGTAT TTGCTCAGTT CATTCAAGCG GCGCACGGAA AAGCCCTGTA CGGGATGGAT
GTGTTACTGT CTAATCCTGA TAGTGTGGCT TACACGGCTT ACCCCAACTA CGGTAATGTG
TGGTTACCCG GTTGGTTAGA GGCGATCAAC AGCAGCACTA ACTCTCTGTT CTTAACCATT
GGGCCAGGAG ACTTCTTAGT TCACCATGCG ATCGCTTTAG GGTTACACAC CACCACCTTA
ATTCTAGTTA AGGGAGCTTT AGACGCTCGT GGCTCTAAAT TAATGCCCGA TAAGAAAGAC
TTCGGTTATG CCTTCCCTTG TGATGGCCCT GGCCGTGGCG GCACTTGCGA CATCTCCGCC
TGGGATGCCT TCTACTTAGC CATGTTCTGG ATGCTCAATA CCCTAGGCTG GTTGACCTTC
TACTGGCACT GGAAGCATTT AGGCATCTGG GAGGGCAACG TCGCTCAATT TAACGAAAAT
TCCACCTATT TGATGGGTTG GTTCCGGGAT TATCTGTGGG CTAACTCGGC GCAATTAATC
AACGGTTACA ACCCTTATGG GGTCAATAAC CTCTCGGTGT GGGCGTGGAT GTTCTTATTC
GGACACCTAG TCTGGGCAAC CGGGTTCATG TTCTTAATTT CTTGGCGGGG TTACTGGCAA
GAGTTAATCG AAACCCTAGT CTGGGCACAC GAACGCACCC CATTAGCGAA CTTGGTACGT
TGGAAAGACA AACCCGTAGC CATGTCAATT GTTCAAGGAC GTTTAGTCGG GTTAGCGCAC
TTCACGGTGG GTTATATCCT GACTTATGCG GCCTTCTTAA TTGCCTCGAC TGCCTCTAAG
TTCAGTTAA
 
Protein sequence
MATKFPKFSQ DLAQDPTTRR IWYGIATAHD FESHDGMTEE NLYQKIFASH FGHIAIIFLW 
TSGTLFHVAW QGNFEQWIKD PVNIRPIAHA IWDPHFGQPA VDAFTQAGAS NPVNIAYSGV
YHWFYTIGMT NNQDLYQGAV FLLILSSLFL FAGWLHLQPK FRPSLAWFKN AESRMNHHLA
GLFGVSSLAW AGHLIHVAIP ESRGQHVGWD NFLSVRPHPA GLMPFFTGNW GVYAQNPDTA
NHVFGTSQGA GTAILTFLGG FHPQTESLWL TDMAHHHLAI AVIFIIAGHM YRTNWGIGHS
MKEILNAHNP PEGTPFGGVL GAGHKGIYDT YNNSLHFQLG IHLAALGVVT SLVAQHMYSM
PPYAFLAKDY TTQAALYTHH QYIAGFLMVG AFAHGAIFWV RDYDPEANKN NVLARMLEHK
EAIISHLSWV SLFLGFHTLG LYVHNDVVVA FGTPEKQILI EPVFAQFIQA AHGKALYGMD
VLLSNPDSVA YTAYPNYGNV WLPGWLEAIN SSTNSLFLTI GPGDFLVHHA IALGLHTTTL
ILVKGALDAR GSKLMPDKKD FGYAFPCDGP GRGGTCDISA WDAFYLAMFW MLNTLGWLTF
YWHWKHLGIW EGNVAQFNEN STYLMGWFRD YLWANSAQLI NGYNPYGVNN LSVWAWMFLF
GHLVWATGFM FLISWRGYWQ ELIETLVWAH ERTPLANLVR WKDKPVAMSI VQGRLVGLAH
FTVGYILTYA AFLIASTASK FS