Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_0402 |
Symbol | psaB |
ID | 7109259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 441791 |
End bp | 444019 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643478676 |
Product | photosystem I P700 chlorophyll a apoprotein A2 |
Protein accession | YP_002375737 |
Protein GI | 218437408 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01336] photosystem I core protein PsaB |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.671863 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACTA AATTTCCAAA ATTTAGCCAG GACTTAGCCC AAGACCCGAC AACTCGTCGG ATCTGGTATG GGATAGCCAC AGCCCACGAC TTTGAAAGTC ATGATGGAAT GACCGAGGAA AATCTCTATC AAAAGATTTT CGCCTCTCAT TTCGGACACA TCGCCATCAT CTTTTTGTGG ACATCCGGCA CCCTATTCCA CGTAGCCTGG CAAGGTAACT TCGAGCAGTG GATTAAAGAC CCAGTTAATA TCCGTCCGAT AGCCCACGCA ATTTGGGATC CCCACTTCGG ACAACCGGCA GTAGATGCGT TTACCCAAGC CGGAGCATCA AACCCAGTCA ACATAGCCTA CTCAGGGGTG TATCACTGGT TCTACACCAT CGGAATGACC AATAACCAAG ATTTATATCA AGGTGCGGTA TTCCTATTGA TTCTGTCGTC ATTGTTCCTA TTTGCGGGCT GGCTGCACCT TCAACCGAAG TTCCGCCCCA GTCTAGCATG GTTCAAAAAT GCAGAATCCC GGATGAACCA CCACCTAGCC GGGTTATTTG GGGTAAGTTC CTTAGCCTGG GCAGGACACT TAATCCACGT CGCTATCCCT GAATCTCGGG GTCAGCACGT CGGTTGGGAT AACTTCCTGT CTGTGCGTCC TCACCCAGCC GGATTGATGC CGTTCTTCAC CGGAAATTGG GGAGTCTATG CCCAAAACCC AGACACGGCT AATCATGTGT TTGGCACATC TCAAGGGGCA GGAACAGCCA TCCTCACCTT CTTAGGTGGA TTCCATCCTC AAACCGAATC CCTGTGGTTG ACGGACATGG CTCACCACCA TTTGGCGATC GCGGTAATCT TCATTATCGC CGGGCATATG TACCGCACCA ACTGGGGTAT CGGTCACAGC ATGAAGGAAA TCCTCAATGC TCACAATCCC CCCGAAGGAA CACCCTTTGG CGGAGTATTA GGAGCAGGAC ACAAGGGAAT TTATGACACC TACAACAACT CGTTGCACTT CCAATTAGGG ATACACTTAG CCGCATTGGG TGTAGTGACC TCCTTGGTAG CGCAACATAT GTACTCGATG CCGCCTTATG CGTTCCTGGC TAAGGATTAC ACCACCCAAG CCGCCTTGTA TACTCACCAC CAATACATTG CCGGATTCTT GATGGTGGGG GCTTTTGCTC ACGGAGCGAT CTTCTGGGTC AGAGATTATG ATCCCGAAGC CAACAAAAAT AATGTGTTGG CGCGGATGCT AGAGCATAAA GAAGCGATCA TCTCCCACTT AAGCTGGGTA TCGTTATTCC TCGGATTCCA CACCCTTGGA CTCTATGTCC ACAATGATGT GGTAGTCGCC TTTGGAACAC CAGAAAAACA AATTTTAATT GAGCCTGTAT TTGCTCAGTT CATTCAAGCG GCGCACGGAA AAGCCCTGTA CGGGATGGAT GTGTTACTGT CTAATCCTGA TAGTGTGGCT TACACGGCTT ACCCCAACTA CGGTAATGTG TGGTTACCCG GTTGGTTAGA GGCGATCAAC AGCAGCACTA ACTCTCTGTT CTTAACCATT GGGCCAGGAG ACTTCTTAGT TCACCATGCG ATCGCTTTAG GGTTACACAC CACCACCTTA ATTCTAGTTA AGGGAGCTTT AGACGCTCGT GGCTCTAAAT TAATGCCCGA TAAGAAAGAC TTCGGTTATG CCTTCCCTTG TGATGGCCCT GGCCGTGGCG GCACTTGCGA CATCTCCGCC TGGGATGCCT TCTACTTAGC CATGTTCTGG ATGCTCAATA CCCTAGGCTG GTTGACCTTC TACTGGCACT GGAAGCATTT AGGCATCTGG GAGGGCAACG TCGCTCAATT TAACGAAAAT TCCACCTATT TGATGGGTTG GTTCCGGGAT TATCTGTGGG CTAACTCGGC GCAATTAATC AACGGTTACA ACCCTTATGG GGTCAATAAC CTCTCGGTGT GGGCGTGGAT GTTCTTATTC GGACACCTAG TCTGGGCAAC CGGGTTCATG TTCTTAATTT CTTGGCGGGG TTACTGGCAA GAGTTAATCG AAACCCTAGT CTGGGCACAC GAACGCACCC CATTAGCGAA CTTGGTACGT TGGAAAGACA AACCCGTAGC CATGTCAATT GTTCAAGGAC GTTTAGTCGG GTTAGCGCAC TTCACGGTGG GTTATATCCT GACTTATGCG GCCTTCTTAA TTGCCTCGAC TGCCTCTAAG TTCAGTTAA
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Protein sequence | MATKFPKFSQ DLAQDPTTRR IWYGIATAHD FESHDGMTEE NLYQKIFASH FGHIAIIFLW TSGTLFHVAW QGNFEQWIKD PVNIRPIAHA IWDPHFGQPA VDAFTQAGAS NPVNIAYSGV YHWFYTIGMT NNQDLYQGAV FLLILSSLFL FAGWLHLQPK FRPSLAWFKN AESRMNHHLA GLFGVSSLAW AGHLIHVAIP ESRGQHVGWD NFLSVRPHPA GLMPFFTGNW GVYAQNPDTA NHVFGTSQGA GTAILTFLGG FHPQTESLWL TDMAHHHLAI AVIFIIAGHM YRTNWGIGHS MKEILNAHNP PEGTPFGGVL GAGHKGIYDT YNNSLHFQLG IHLAALGVVT SLVAQHMYSM PPYAFLAKDY TTQAALYTHH QYIAGFLMVG AFAHGAIFWV RDYDPEANKN NVLARMLEHK EAIISHLSWV SLFLGFHTLG LYVHNDVVVA FGTPEKQILI EPVFAQFIQA AHGKALYGMD VLLSNPDSVA YTAYPNYGNV WLPGWLEAIN SSTNSLFLTI GPGDFLVHHA IALGLHTTTL ILVKGALDAR GSKLMPDKKD FGYAFPCDGP GRGGTCDISA WDAFYLAMFW MLNTLGWLTF YWHWKHLGIW EGNVAQFNEN STYLMGWFRD YLWANSAQLI NGYNPYGVNN LSVWAWMFLF GHLVWATGFM FLISWRGYWQ ELIETLVWAH ERTPLANLVR WKDKPVAMSI VQGRLVGLAH FTVGYILTYA AFLIASTASK FS
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