Gene PCC7424_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0401 
Symbol 
ID7109258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp440350 
End bp441507 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content45% 
IMG OID643478675 
Product17 kDa surface antigen 
Protein accessionYP_002375736 
Protein GI218437407 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.693676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACA ATACGATGGA TCTTAATCAA TCCAATGATC AATTGCAAAA CTCTTCACAG 
TCCAATCAAA AGCCAAATCC GATAGATACA GTAGCAACAG GCGTTGGGGT CGTCAGTGGA
GGATTGGCCG GAGCAGCAAT TGGTCGTTTG GTCGGAGGTC GCTTAGGGGC GGCTGTGGGT
GCGGTGATTG GCGGTGTTGC AGGCGCTAAT GTTGGACATG AAGTCGCTGA AGGTGTTGAT
CACTCCATCG AAGGTGTTGT TGATAATGTT AAAAACAATG TCAAGCAGAC AGTTGAAGAA
ATTAAGCCCT CAGTAAAAGA GACGGTAAAT TCCCTCAAGC AGACAGTTGA AGAAGTTAAG
CCCTCAGTCT CTGGAGCAGT CGATTCAGTT CGACAAACGA TTGACGAGAC TCGTCCTTCA
ATGAAAAAAG CCATTGATGC AGCGACAGAA ACCATCGATG AAACTCGTCC GGCGATCGTG
GAGACGGCGG ATACAGTCAA GGAAACTGTT AAAGATGCAC GGCCTGCTGT TAAGAAAGCA
GTTGATAAGA CTTCCGAGAG CATTCAATCC TCTACTGAGA GTCTAGCCAA ATCAGTACAA
GGGGCGGGAG AGTCGGTTAA AGATGCTGCT CAAGAAGCTA AACCCAAAAT GAGAAGAGCG
ATGGAGAGTG TATCTGACGA TGTGCAGTCG TCAGCATCTA AAGTGGCAGA TTCAGTCAAA
GGTGCAGCCT CAAATCAAAA TACTACCCCA ACCAGTAGTA TTAATAGGGC TACTCAAGAG
GTAAGTTCTG TCAGAACTCA GTCTAGCACT GAGCAGACGG TTGATTTAAC TAAGCAGATG
ACTTCTTCTG CTCCCATCTC AGGAAGTGGT GCTTCCCAAA ATTTTGACTT AGCTCAAAGA
GAATTTGAGC AAGGGATTAA GCTTGCTAGC CAAAATGATT TTACTGGGGC ACAAACTGCC
TTTAGAAACG GGATTAAAGT TATGCCTGAG TCTCCAGAAT TACACTATAA CTTGGGTGTT
GTTCTGTTAG AGCAAGGTAA AAAGACCGAG GGAATTGATT ATATTCGCCA AGCACGTGAT
TTATCTCGTA TTCAAGGGAA TACCCAGGCC GCAAAAACTC TTGAAAATAT TCTCAAACAG
ATAGAAGTGG TTAAGTAA
 
Protein sequence
MSDNTMDLNQ SNDQLQNSSQ SNQKPNPIDT VATGVGVVSG GLAGAAIGRL VGGRLGAAVG 
AVIGGVAGAN VGHEVAEGVD HSIEGVVDNV KNNVKQTVEE IKPSVKETVN SLKQTVEEVK
PSVSGAVDSV RQTIDETRPS MKKAIDAATE TIDETRPAIV ETADTVKETV KDARPAVKKA
VDKTSESIQS STESLAKSVQ GAGESVKDAA QEAKPKMRRA MESVSDDVQS SASKVADSVK
GAASNQNTTP TSSINRATQE VSSVRTQSST EQTVDLTKQM TSSAPISGSG ASQNFDLAQR
EFEQGIKLAS QNDFTGAQTA FRNGIKVMPE SPELHYNLGV VLLEQGKKTE GIDYIRQARD
LSRIQGNTQA AKTLENILKQ IEVVK