Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_0399 |
Symbol | psaB |
ID | 7109256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | - |
Start bp | 435937 |
End bp | 438153 |
Gene Length | 2217 bp |
Protein Length | 738 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643478673 |
Product | photosystem I P700 chlorophyll a apoprotein A2 |
Protein accession | YP_002375734 |
Protein GI | 218437405 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01336] photosystem I core protein PsaB |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.992775 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACTA AATTTCCAAA ATTTAGCCAG GACTTAGCCC AAGACCCGAC AACTCGTCGG ATTTGGTATG GGATAGCCAC AGCCCACGAC TTTGAAAGTC ATGATGGAAT GACCGAGGAA AATCTCTATC AAAAGATTTT CGCCTCTCAT TTCGGACACA TCGCCATCAT CTTTTTGTGG ACATCCGGCA CCCTATTCCA CGTAGCCTGG CAAGGTAACT TCGAGCAGTG GATTAAAGAC CCAGTTAATA TCCGTCCGAT AGCCCACGCA ATTTGGGATC CCCACTTCGG ACAACCGGCA GTAGATGCGT TTACCCAAGC CGGAGCATCA AACCCAGTCA ACATAGCCTA CTCAGGGGTG TATCACTGGT TCTACACCAT CGGAATGACC AATAACCAAG ATTTATATCA AGGTGCGGTA TTCCTATTGA TTCTGTCGTC ATTGTTCCTA TTTGCGGGCT GGCTGCACCT TCAACCGAAG TTCCGCCCCA GTCTAGCATG GTTCAAAAAT GCAGAATCCC GGATGAACCA CCACCTAGCG GGGTTATTTG GGGTAAGTTC CTTAGCCTGG GCAGGACACT TAATCCACGT CGCTATCCCT GAATCTCGGG GTCAGCACGT CGGTTGGGAT AACTTTTTAT CCACCCCTCC TCACCCAGCC GGATTGTTGC CGTTCTTCAC CGGAAATTGG GGAGTCTATG CCCAAAACCC AGACACGGCT AATCATGTGT TTGGCACATC TCAAGGGGCA GGAACAGCCA TCCTCACCTT CTTAGGTGGA TTCCATCCTC AAACCGAATC CCTGTGGTTG ACGGACATGG CTCACCACCA TTTGGCGATC GCGGTAATCT TCATTATCGC CGGGCATATG TACCGCACCA ACTGGGGTAT CGGTCACAGC ATGAAGGAGA TTCTCAATGC CCACAACCCC CCCGAAGGAA CACCCTTTGG CGGAGTATTA GGAGCAGGAC ACAAGGGAAT TTATGACACC TACAACAACT CCCTACACTT CCAATTAGGG ATACACTTAG CCGCCTTGGG TGTGGTGACC TCCTTGGTAG CGCAACATAT GTACTCTCTG CCGCCCTACG TATTCATGGG CAAAGATTAC ACCACCCAAG CCGCCTTATA TACTCACCAC CAATACATCG CAGGATTCTT AATGGTGGGG GCATTTGCTC ACGGAGCGAT CTTCTGGGTC AGAGATTATG ATCCCGAAGC CAACAAAAAT AATGTGTTGG CGCGGATGCT AGAGCATAAA GAAGCGATCA TCTCCCACTT AAGTTGGGTA TCGTTATTCT TAGGCTTCCA CACCTTGGGA CTGTATGTTC ACAATGACGT AGTCGTCGCC TTTGGAACAC CAGAAAAACA AATTTTAATT GAGCCAGTGT TTGCTCAGTT CATTCAAGCG GCGCACGGAA AAGCCCTATA CGGGATGGAT GTGTTGCTCT CTAACCCTGA TAGTGTTACT AACAACCCCA ATGCAATTTG GTTGCCCGGT TGGTTAGACG CGATCAACAC TAGCACTAAC TCTCTGTTCT TAACCATTGG GCCAGGAGAC TTCTTGGTTC ACCATGCGAT CGCTTTAGGG TTACACACCA CCACCTTAAT TCTAGTTAAG GGAGCTTTAG ACGCTCGTGG CTCTAAATTA ATGCCCGATA AGAAAGACTT CGGTTATGCC TTCCCTTGTG ATGGCCCTGG CCGTGGCGGC ACTTGCGACA TCTCCGCTTG GGATGCCTTC TACTTAGCCA TGTTCTGGAT GCTCAATACC CTAGGCTGGT TGACCTTCTA CTGGCACTGG AAGCATTTAG GCATCTGGGA GGGCAACGTC GCTCAATTTA ACGAAAATTC CACCTATTTG ATGGGTTGGT TCCGGGATTA TCTGTGGGCT AACTCGGCGC AATTAATCAA CGGTTACAAC CCTTATGGGG TCAATAACCT CTCGGTGTGG GCGTGGATGT TCTTATTCGG ACACCTAGTC TGGGCAACCG GGTTCATGTT CTTAATTTCT TGGCGGGGTT ACTGGCAAGA GTTAATCGAA ACCCTAGTCT GGGCACACGA ACGCACCCCA TTAGCGAACT TGGTACGTTG GAAAGACAAA CCCGTAGCCA TGTCAATTGT TCAAGGACGT TTAGTCGGGT TAGCGCACTT CACGGTGGGT TATATCCTGA CCTATGCGGC CTTCTTAATT GCCTCGACTG CCTCTAAGTT CAGTTAA
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Protein sequence | MATKFPKFSQ DLAQDPTTRR IWYGIATAHD FESHDGMTEE NLYQKIFASH FGHIAIIFLW TSGTLFHVAW QGNFEQWIKD PVNIRPIAHA IWDPHFGQPA VDAFTQAGAS NPVNIAYSGV YHWFYTIGMT NNQDLYQGAV FLLILSSLFL FAGWLHLQPK FRPSLAWFKN AESRMNHHLA GLFGVSSLAW AGHLIHVAIP ESRGQHVGWD NFLSTPPHPA GLLPFFTGNW GVYAQNPDTA NHVFGTSQGA GTAILTFLGG FHPQTESLWL TDMAHHHLAI AVIFIIAGHM YRTNWGIGHS MKEILNAHNP PEGTPFGGVL GAGHKGIYDT YNNSLHFQLG IHLAALGVVT SLVAQHMYSL PPYVFMGKDY TTQAALYTHH QYIAGFLMVG AFAHGAIFWV RDYDPEANKN NVLARMLEHK EAIISHLSWV SLFLGFHTLG LYVHNDVVVA FGTPEKQILI EPVFAQFIQA AHGKALYGMD VLLSNPDSVT NNPNAIWLPG WLDAINTSTN SLFLTIGPGD FLVHHAIALG LHTTTLILVK GALDARGSKL MPDKKDFGYA FPCDGPGRGG TCDISAWDAF YLAMFWMLNT LGWLTFYWHW KHLGIWEGNV AQFNENSTYL MGWFRDYLWA NSAQLINGYN PYGVNNLSVW AWMFLFGHLV WATGFMFLIS WRGYWQELIE TLVWAHERTP LANLVRWKDK PVAMSIVQGR LVGLAHFTVG YILTYAAFLI ASTASKFS
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