| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0321 |
|---|
| Symbol | |
|---|
| ID | 7108939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 348468 |
|---|
| End bp | 351203 |
|---|
| Gene Length | 2736 bp |
|---|
| Protein Length | 911 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643478596 |
|---|
| Product | protein of unknown function DUF187 |
|---|
| Protein accession | YP_002375657 |
|---|
| Protein GI | 218437328 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1649] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.140793 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGAGAA TTGCTTTGAG AGCCAAACCC CCGTTAATCT TGAAAGTCCT TCAGAGAAAA
CAATTCATCA CACTACTCTC CTGTATACTC CCCTTGACTC TTTCAACGTT ACCGGCCATC
GCCTCTAGTC GCCCGGTTGG GGTCGTGAAA AGTTCCGAAA ATAGCCAACA ATGGACGGAA
ATTACCAACC GATTAAAAGC CATCGGAGTA GACTACTGTA TTTTAGACCA GGCTCAATGG
CAGCAAGCAT CAGACTTAAA TAATATTAAA GTTCTTTTTT TACCGAATGT AGAAAATATT
AACAACTCTC AAGTCAGTGC CCTCGAACAA TGGATGAACC AAGGGGGACA AGTGATTGTT
AGCGGCCCGA CGGGGATGTT ATCTCAGCCT GAGATACAAT CTCAATTACG CTCTTTATTT
GGAGCTTATT GGGGTTTTAG TAACTCCTCT GCCGCTAGGT TAAGATTAGT TGATAATCCT
TATTCAGATT GGACAGGCCG ACAAAACACT TTATCTAATA CCTTTGTTGG TGGGGTGGTT
ATTCCCACTA GCGTTAATAG TCGAACTACC GCCACCTGGA AAACCAAAGG CTCTCCCCCG
GCAGTGGTGG TAACGGATCG ATCGACCTAT TTAGGATGGC GTTGGGGAGA AGATCGAGTA
GCCCCGGCGA GTTTTGATGT AGCTTGGTTA AGTGCCTCTC TTAACCGTTA TGGCATTAAT
CGCACTAATC CGGTTTCGGT GTTAGCGTCA GCCGGCGCGA GTGTCTGTAA CCCTCAATCT
ACGGTTAGTC AGCCCTCAGT TCCCATTTTA CCCCAACAAC AAAGCAGCAC ACCCGTACAA
GTTCCTCAAC AACAGCCTCT CGCGTCAACT CCTCCAACCC CTGCTAATGA GCAAACTTTT
CGCGTTCCGA CTGATGCTCC TTCCAATCAA TTGGAACTGT CTTACCAACA AGTTCAAGAA
ATGACAGAGG AATTAGGACA ATTAATAGCG AGGGTTGAAA GTACCCTTTT AGCTGCCGAA
GCGACTAATA TTACGCTTAA TTCCGAGGCT CATACGTTAA TCGAAGATTC TATCCAACAA
AAGGGAACAC TTCAAGCCAG TTTAGTCACC GTTTCTAAAA ATAATCGGTC TTATCAAGCA
CTGGTAGAGG CAAGAGAAGC CCTAAAAACC TTTCAACAAT TGGTGCAGGA GAATAAAGAT
GATGAGGCTC GTCGCTTATG GCTCAAAGCA AGACGCAATC TCTGGGATCA TTATCCTACC
GATCGCCAAT TTGCTCAAGC CGAAATCCGG GCAATCTGGC TCGATCGCGG TACGATCGTT
CAAGCGAAAT CAGAGCAAGA CTTAGCGAAA ATATTCGATC GTATGGCGCA CTCAGGGATC
AACGTGGTCT TTTTTGAAAC TTTAAACGCC AGTTACCCCA TTTATCCCAG TAAAATTGCT
CCTGAACAAA ATCCCCTCAC CCAAGGATGG GATCCGCTTA AATCAGCGAT TAAGTTAGCC
CATGAGCGAA ACATGGAGTT ACACGCTTGG ACGTGGATTT TTGCGGCGGC TAATCAACGT
CATAATCTCA TTCTCAATCA ACCTCTTGAT TATTTAGGGC CAGTTTTATC CCGAAATCCC
GAATGGGCAA ATATTAACAA GCAAGGGGGG TTATTCGATT ATTCTCAAGG CTATAAAAAA
GCCTTTTTTG ATCCGGCCAA TCCAGAAGTA CAACGTTATT TGTTATCCCT GCTCGAAGAA
ATCGTCACTA ATTATGATGT AGATGGGATT CAATTTGATT ATATTCGTTA TCCGTTTCAA
TCTCCCAATC AACAAGAAAT TTTTGGCTAC AGTAACTCTT CTCGATGGTT ATTTAAAGAA
ATGACGGGAG TTGATCCGGT AGAGGTTCAA CCCGGATCAG CGCTTTGGAG TCAATGGACG
GCTTTTCGGA TGCGCCAAGT CGATAGTTTT GTGGCGACTG CATCGGCGCG TCTTAAGCAA
CGTCGGCCAG ATTTAATGGT GTCGGCGGCG GTTTTTCCCT TAGAACGCCA AGATCGTCTC
AATCGATTAC AACAAAATTG GGAAGAATGG GGTCAAAATA ATTGGGTTGA TTTAATTTTC
TTGATGACCT ATGCTTTAGA TACGGGCAGT TTTGAGGATA GAATCAGACC TTTAAATCAA
CCGGGTAGTG CAGGAGCGAG TTTAGTGATT CCGGGGTTAC GCTTGTTAAA AGTACCGGAT
CCGGTGACGA TCGATCAAAT GCAGTTGGTG CGTAATATGC CTACCAGTGG CTTTGCTTTG
TTTGCCGCCG AAAATTTAAC CCCTAATTTA GAAAGTATTT TTAATCGCAC CCAAGGCTCT
TTAACGGCAA ATGAAAAAGA ACCTTTACCC CATCGTCAGC CTTTTAATAC AGTAGCCGCT
CGTTATCAAG CCTTGCAACG GGAATGGAGT GTGTTACTGA TTAACGATCA ATTGGCGATG
GATGAGGGGA CAATGAAACA ATGGGGCAGA CAAGTTGATA GTTTAGCCAA TACTTTCAAT
CAGTTAGCCC AACAGCCTAC CCCAGAAAAA TTATCCGCTT CTAAAACCGC ACTCAGACAG
TTTCGTCAAC AGTTTGGGGG GTGGATGCGG CAGCAACAAC AAGTTCAACC TTATCAAGTC
CAAGTGTGGC AAAACCGTTT AGAAACCTTA GATAGATTGT TAGTTTATGG GGAACGGATG
ATGATTGCAC AAAGAGCAAG GGAAAGAAGG GAATAA
|
|---|
| Protein sequence | MLRIALRAKP PLILKVLQRK QFITLLSCIL PLTLSTLPAI ASSRPVGVVK SSENSQQWTE
ITNRLKAIGV DYCILDQAQW QQASDLNNIK VLFLPNVENI NNSQVSALEQ WMNQGGQVIV
SGPTGMLSQP EIQSQLRSLF GAYWGFSNSS AARLRLVDNP YSDWTGRQNT LSNTFVGGVV
IPTSVNSRTT ATWKTKGSPP AVVVTDRSTY LGWRWGEDRV APASFDVAWL SASLNRYGIN
RTNPVSVLAS AGASVCNPQS TVSQPSVPIL PQQQSSTPVQ VPQQQPLAST PPTPANEQTF
RVPTDAPSNQ LELSYQQVQE MTEELGQLIA RVESTLLAAE ATNITLNSEA HTLIEDSIQQ
KGTLQASLVT VSKNNRSYQA LVEAREALKT FQQLVQENKD DEARRLWLKA RRNLWDHYPT
DRQFAQAEIR AIWLDRGTIV QAKSEQDLAK IFDRMAHSGI NVVFFETLNA SYPIYPSKIA
PEQNPLTQGW DPLKSAIKLA HERNMELHAW TWIFAAANQR HNLILNQPLD YLGPVLSRNP
EWANINKQGG LFDYSQGYKK AFFDPANPEV QRYLLSLLEE IVTNYDVDGI QFDYIRYPFQ
SPNQQEIFGY SNSSRWLFKE MTGVDPVEVQ PGSALWSQWT AFRMRQVDSF VATASARLKQ
RRPDLMVSAA VFPLERQDRL NRLQQNWEEW GQNNWVDLIF LMTYALDTGS FEDRIRPLNQ
PGSAGASLVI PGLRLLKVPD PVTIDQMQLV RNMPTSGFAL FAAENLTPNL ESIFNRTQGS
LTANEKEPLP HRQPFNTVAA RYQALQREWS VLLINDQLAM DEGTMKQWGR QVDSLANTFN
QLAQQPTPEK LSASKTALRQ FRQQFGGWMR QQQQVQPYQV QVWQNRLETL DRLLVYGERM
MIAQRARERR E
|
|---|
| |