Gene PCC7424_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0289 
Symbol 
ID7110533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp315400 
End bp316596 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content43% 
IMG OID643478564 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_002375625 
Protein GI218437296 
COG category[I] Lipid transport and metabolism 
COG ID[COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 
TIGRFAM ID[TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.858319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAAA TTTCTGTTCT TGGTTCAACA GGTTCTATAG GAACTCAAAC CCTCGATATT 
GTCGCTCAAT ATCCGGATCA ATTTCAAGTG GTTGGGTTAG CAGCCGGTAA CAATGTAGAA 
TTACTCTCGG CACAAGTGCA TCAATTCCGC CCGGAAATTG TCGCTATTTG TAATCTTGAC 
CATCTCGAAG TCCTTAAAGA GTCTCTCTCC TCCCTCGATT ATTCTCCGAT TATTTTAGGG 
GGAGAACAGG GTATAGTTGA AGTGGCCGGT TATGGGGATG CTCAAAGTGT AGTTACGGGT 
ATCGTCGGAT GTGCCGGGTT ATTACCGACT ATTGCTGCTA TTAAAGCGGG TAAAGATATT 
GCTTTAGCGA ATAAAGAAAC CTTAATCGCT GGGGGGCCGG TGGTGTTACC CTTAATCGAA 
AAACATGGGG TAAAATTATT ACCGGCGGAC TCAGAACATT CGGCTATTTT TCAATGTTTG 
CAAGGAGTCC CCGAAAAAGG TCTCAGAAAA ATTCTTTTAA CCGCTTCTGG GGGGTCTTTT 
CGAGATTTAC CCGTCGAAAA ATTAAGCACC GTTACGGTAC AGGATGCCCT AAAACATCCC 
AATTGGTCAA TGGGACGCAA AATTACCATT GATTCTGCTA CCCTAATGAA TAAGGGATTA 
GAGGTCATAG AAGCTCATTA CTTATTTGGC TTAGATTACG ATCGCATCGA AATTGTGATT 
CATCCCCAGA GTATTATTCA TTCTCTTATT GAGTTACAAG ATACCTCAGT TTTGGCTCAA 
TTGGGGTGGC CGGATATGCG TTTACCTTTG CTTTATGCGT TATCTTGGCC AGAACGAATT 
TATACCGATT GGGAAACTTT AGACTTAGTT AAAGTGGGAA GTTTGACTTT CCGAGAACCG 
GATCATCATA AGTATCCTTG CATGAAATTA GCTTATGCGG CGGGACGGGC AGGGGGTGCT 
ATGCCGGCGG TTTTAAATGC GGCTAATGAA CAAGCAGTTG CTCTCTTTTT AGAGGAAAGA 
ATTGGCTTTT TAGATATTCC TCGCTTAATT GAAACGGTTT GCGATCGCTT TACCACTCAC 
AATCAGGCTC ATCCTACATT AGATGATATC ATATCTGCCG ATCAATGGGC GAGAGGGGAA 
GTGATTCGGG CTAATGAAGT TATAGAAAAA AGCGATCGGA TTGTGTCTGT TCGGTAA
 
Protein sequence
MKKISVLGST GSIGTQTLDI VAQYPDQFQV VGLAAGNNVE LLSAQVHQFR PEIVAICNLD 
HLEVLKESLS SLDYSPIILG GEQGIVEVAG YGDAQSVVTG IVGCAGLLPT IAAIKAGKDI 
ALANKETLIA GGPVVLPLIE KHGVKLLPAD SEHSAIFQCL QGVPEKGLRK ILLTASGGSF 
RDLPVEKLST VTVQDALKHP NWSMGRKITI DSATLMNKGL EVIEAHYLFG LDYDRIEIVI 
HPQSIIHSLI ELQDTSVLAQ LGWPDMRLPL LYALSWPERI YTDWETLDLV KVGSLTFREP 
DHHKYPCMKL AYAAGRAGGA MPAVLNAANE QAVALFLEER IGFLDIPRLI ETVCDRFTTH 
NQAHPTLDDI ISADQWARGE VIRANEVIEK SDRIVSVR