Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_0273 |
Symbol | |
ID | 7110517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 297256 |
End bp | 299139 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643478548 |
Product | polysaccharide deacetylase |
Protein accession | YP_002375609 |
Protein GI | 218437280 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTC TATTTAATCA TCTATTAAAT CAAAAGACGG GTTATAAATC TTTTTTGTTT CTCGGTGGTG CATTGATCAT TGCGGGGAGT ATTATAGTCT TAACGCGATC GGGAATTTCA GAACCTCAAG ACTCATCATC GTTGTATACT CAATTTCCCT TAGCCCCTTC TTTCAACAAT TTAGAGGAAT TTTGCGCTGA AAATGTAAAG GGGACTACAT CAACTGTCTC AAGTAATATT CTCTGTTCAG AAAGAGGGAT TAAACCGCAA GAATTTATTA CCCCGAACCC TGAACGAGAT AAACCGATAG ATGTTATCGA TATTACTCTA AATACTTGGG AAAATAGTAG ATCTCTGATT CCTTTAAGTC CTTGGCCAAC GATTAATAAT CACGCCAAAT TAGCCAAAGT TCCCGTGATT ATGTATCATG ACATTTTACC GAAAAAAGAA GTCTTTTTTG ATGTTACTCC AGAAGAACTT GAAGAGCATT TTAAGTTAAT TCAAGACCAA GGATTAACCC CCATTAGTTT AAATCTATTA ATTGCCCATT TAAGAAGCGG TTTCCCCTTA CCCGAAAAAC CGATTTTATT AACCTTTGAT GATGGATATG GGGGACATTA TAAATATGTT TATCCCTTAT TAAAAAAATA CGGTTATCCG GCGACTTTTT CGATTTATGT GAAAAAAATG GAGATGAAAA CCGGACGAAC TAGCGTCACT TGGGAACAAT TAAAAGAAAT GGCCGCCGAT CCTTTAGTAA CGATTGTTTC CCATAGTGTG ACTCATCCTA GGGATTTAAG AGAATTAAGT GATGATCAAT TACGGACAGA AATTATCGAG TCAAAACGCA TTTTAGAACA ACAATTAAAC ATTCCCATCG ATTATTTTAC CTATCCAGAA GGTAAAGCAG ATGCCAGAGT CAAACAATGG GTAGCCGCCG CCGGATATCG GGGCGCATTA TCAATGAATG ATCTCGATGA ACATTTTGCC GGAGAATCCC CTGATTTACT GACTATAGGA CGTTTTGGCC AGTCTCGCAT CCGAGAAGTC ATCGAACAAG CTTGGGGGGG TTATCCTGCC CCTAGATATG ACGGAGGATT TAATTTTAAT ACTCGGATCT ACAAACAAGA TTTTACCGTT AATGATACCC AATTAACCCT GATTACCGGA GGAAGACCGA ATACTATTCA TGCAGATACT CGTTATCAAG TCTCAGAAAT TATCGCAGGA ACAGGGGCAG AAGCGGCAGT AGATGGGGGC TTTTTCTCGT TAGAGTCTTT AGATTCTAAT GTGATGATTG GGCCAGTTTT AGGTCACAAT ACCGGAGAGT TTATTCCGGG GAATGCCTGG GAAATTCCCA GAATTAAAGG TCGTCCTCTA GTCTTAATGA GTAGCGATCG GGTGAGATTT GTTCCTTTTG ATCCCAATAA ACATAATACT TATGAAGGGG TTATCTCAGA AGCCACCGAG GGAGAAAAAA TTACCGATGC TTTTGTTGGG GCAGCTTGGT TAGTGCGAGA TAATCAACCT CAACCGCCAG AAGCTTTTGG AGAATTATTT GATTTTGAGG CCGCCCGTCA TCGGGCATTT TGGGGTATTA ACCAAGCCGG ACAACCGGTT ATCGGGGTGA CTAAAACGAT GGTGGGTTCT GTCGAATTAG GGGAAATTTT GCATCAATTA GGACTCAGAG ATGCGGTTAT GTTGGATTCT GGGGCGAGTA CCTCTCTAGC TTATCAAGGA GAATCTTTAG TCGGTTATAC TCCTCGTCCG GTTCCTCATG TCGTGGCATT ATTTCCTCCC TTGCCCAGTT TACCTGAGTT CGGTTATTTA GGATTACCCT GTATGATTTA TCAGGAGTCT TGTGTTATTT CGTCTCAACC CTAG
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Protein sequence | MKTLFNHLLN QKTGYKSFLF LGGALIIAGS IIVLTRSGIS EPQDSSSLYT QFPLAPSFNN LEEFCAENVK GTTSTVSSNI LCSERGIKPQ EFITPNPERD KPIDVIDITL NTWENSRSLI PLSPWPTINN HAKLAKVPVI MYHDILPKKE VFFDVTPEEL EEHFKLIQDQ GLTPISLNLL IAHLRSGFPL PEKPILLTFD DGYGGHYKYV YPLLKKYGYP ATFSIYVKKM EMKTGRTSVT WEQLKEMAAD PLVTIVSHSV THPRDLRELS DDQLRTEIIE SKRILEQQLN IPIDYFTYPE GKADARVKQW VAAAGYRGAL SMNDLDEHFA GESPDLLTIG RFGQSRIREV IEQAWGGYPA PRYDGGFNFN TRIYKQDFTV NDTQLTLITG GRPNTIHADT RYQVSEIIAG TGAEAAVDGG FFSLESLDSN VMIGPVLGHN TGEFIPGNAW EIPRIKGRPL VLMSSDRVRF VPFDPNKHNT YEGVISEATE GEKITDAFVG AAWLVRDNQP QPPEAFGELF DFEAARHRAF WGINQAGQPV IGVTKTMVGS VELGEILHQL GLRDAVMLDS GASTSLAYQG ESLVGYTPRP VPHVVALFPP LPSLPEFGYL GLPCMIYQES CVISSQP
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