| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0273 |
|---|
| Symbol | |
|---|
| ID | 7110517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 297256 |
|---|
| End bp | 299139 |
|---|
| Gene Length | 1884 bp |
|---|
| Protein Length | 627 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643478548 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_002375609 |
|---|
| Protein GI | 218437280 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTC TATTTAATCA TCTATTAAAT CAAAAGACGG GTTATAAATC TTTTTTGTTT
CTCGGTGGTG CATTGATCAT TGCGGGGAGT ATTATAGTCT TAACGCGATC GGGAATTTCA
GAACCTCAAG ACTCATCATC GTTGTATACT CAATTTCCCT TAGCCCCTTC TTTCAACAAT
TTAGAGGAAT TTTGCGCTGA AAATGTAAAG GGGACTACAT CAACTGTCTC AAGTAATATT
CTCTGTTCAG AAAGAGGGAT TAAACCGCAA GAATTTATTA CCCCGAACCC TGAACGAGAT
AAACCGATAG ATGTTATCGA TATTACTCTA AATACTTGGG AAAATAGTAG ATCTCTGATT
CCTTTAAGTC CTTGGCCAAC GATTAATAAT CACGCCAAAT TAGCCAAAGT TCCCGTGATT
ATGTATCATG ACATTTTACC GAAAAAAGAA GTCTTTTTTG ATGTTACTCC AGAAGAACTT
GAAGAGCATT TTAAGTTAAT TCAAGACCAA GGATTAACCC CCATTAGTTT AAATCTATTA
ATTGCCCATT TAAGAAGCGG TTTCCCCTTA CCCGAAAAAC CGATTTTATT AACCTTTGAT
GATGGATATG GGGGACATTA TAAATATGTT TATCCCTTAT TAAAAAAATA CGGTTATCCG
GCGACTTTTT CGATTTATGT GAAAAAAATG GAGATGAAAA CCGGACGAAC TAGCGTCACT
TGGGAACAAT TAAAAGAAAT GGCCGCCGAT CCTTTAGTAA CGATTGTTTC CCATAGTGTG
ACTCATCCTA GGGATTTAAG AGAATTAAGT GATGATCAAT TACGGACAGA AATTATCGAG
TCAAAACGCA TTTTAGAACA ACAATTAAAC ATTCCCATCG ATTATTTTAC CTATCCAGAA
GGTAAAGCAG ATGCCAGAGT CAAACAATGG GTAGCCGCCG CCGGATATCG GGGCGCATTA
TCAATGAATG ATCTCGATGA ACATTTTGCC GGAGAATCCC CTGATTTACT GACTATAGGA
CGTTTTGGCC AGTCTCGCAT CCGAGAAGTC ATCGAACAAG CTTGGGGGGG TTATCCTGCC
CCTAGATATG ACGGAGGATT TAATTTTAAT ACTCGGATCT ACAAACAAGA TTTTACCGTT
AATGATACCC AATTAACCCT GATTACCGGA GGAAGACCGA ATACTATTCA TGCAGATACT
CGTTATCAAG TCTCAGAAAT TATCGCAGGA ACAGGGGCAG AAGCGGCAGT AGATGGGGGC
TTTTTCTCGT TAGAGTCTTT AGATTCTAAT GTGATGATTG GGCCAGTTTT AGGTCACAAT
ACCGGAGAGT TTATTCCGGG GAATGCCTGG GAAATTCCCA GAATTAAAGG TCGTCCTCTA
GTCTTAATGA GTAGCGATCG GGTGAGATTT GTTCCTTTTG ATCCCAATAA ACATAATACT
TATGAAGGGG TTATCTCAGA AGCCACCGAG GGAGAAAAAA TTACCGATGC TTTTGTTGGG
GCAGCTTGGT TAGTGCGAGA TAATCAACCT CAACCGCCAG AAGCTTTTGG AGAATTATTT
GATTTTGAGG CCGCCCGTCA TCGGGCATTT TGGGGTATTA ACCAAGCCGG ACAACCGGTT
ATCGGGGTGA CTAAAACGAT GGTGGGTTCT GTCGAATTAG GGGAAATTTT GCATCAATTA
GGACTCAGAG ATGCGGTTAT GTTGGATTCT GGGGCGAGTA CCTCTCTAGC TTATCAAGGA
GAATCTTTAG TCGGTTATAC TCCTCGTCCG GTTCCTCATG TCGTGGCATT ATTTCCTCCC
TTGCCCAGTT TACCTGAGTT CGGTTATTTA GGATTACCCT GTATGATTTA TCAGGAGTCT
TGTGTTATTT CGTCTCAACC CTAG
|
|---|
| Protein sequence | MKTLFNHLLN QKTGYKSFLF LGGALIIAGS IIVLTRSGIS EPQDSSSLYT QFPLAPSFNN
LEEFCAENVK GTTSTVSSNI LCSERGIKPQ EFITPNPERD KPIDVIDITL NTWENSRSLI
PLSPWPTINN HAKLAKVPVI MYHDILPKKE VFFDVTPEEL EEHFKLIQDQ GLTPISLNLL
IAHLRSGFPL PEKPILLTFD DGYGGHYKYV YPLLKKYGYP ATFSIYVKKM EMKTGRTSVT
WEQLKEMAAD PLVTIVSHSV THPRDLRELS DDQLRTEIIE SKRILEQQLN IPIDYFTYPE
GKADARVKQW VAAAGYRGAL SMNDLDEHFA GESPDLLTIG RFGQSRIREV IEQAWGGYPA
PRYDGGFNFN TRIYKQDFTV NDTQLTLITG GRPNTIHADT RYQVSEIIAG TGAEAAVDGG
FFSLESLDSN VMIGPVLGHN TGEFIPGNAW EIPRIKGRPL VLMSSDRVRF VPFDPNKHNT
YEGVISEATE GEKITDAFVG AAWLVRDNQP QPPEAFGELF DFEAARHRAF WGINQAGQPV
IGVTKTMVGS VELGEILHQL GLRDAVMLDS GASTSLAYQG ESLVGYTPRP VPHVVALFPP
LPSLPEFGYL GLPCMIYQES CVISSQP
|
|---|
| |