Gene PCC7424_0268 details

Gene Information

• Locus tag: PCC7424_0268
• Symbol: xseA
• ID: 7110512
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 7424
• Kingdom: Bacteria
• Replicon accession: NC_011729
• Strand: +
• Start bp: 293559
• End bp: 294713
• Gene Length: 1155 bp
• Protein Length: 384 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 643478543
• Product: exodeoxyribonuclease VII large subunit
• Protein accession: YP_002375604
• Protein GI: 218437275
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1570] Exonuclease VII, large subunit
• TIGRFAM ID: [TIGR00237] exodeoxyribonuclease VII, large subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 67
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGTATTA CCTTTTCTGA GACAGCTTTA TCCGTTTCTG GTTTAACCAC TTATATTCAA 
GATTTATTAG AGGGAGACGA ACAATTACAA CAGGTTTGGG TAACTGGGGA AGTCTCTAGT 
CTCAATGATC ATCCCAGAGG GCTATTTTTT ACTCTCAGTG ATCCTCAAGT AGAAGCCGCC 
GTCAATTGTG TTGTCTGGAA TTCTCAACGG TTGCGACTGG TAGAAGAACC CAAAGTCGGG 
GCACAAATTT TAGTATTAGG GAGTATTCGT CTCTATGCTA AACGGGGTGA TTATCGGTTA 
ACGGTTTTTC AAGTTTTAGC CGTAGGGGAA GGGTTACAAG CGTTACGATA TCAACAATTG 
CGATCGCGTT TACAAGCGGA GGGGTTATTT GATCACGAGA GAAAACGCCT CTTACCCCTC 
CATCCACAAA CTATCGCCGT TGTCACTTCT CCTACTGCCG CCGCCTGGGG AGATATTCAA 
CGAACTCTCT CCCAACGTTA TCCGGGGTTA CATCTTTTAT TTTCTCCTGC CACTGTACAA 
GGGGAAGAAG CGCCTCCCTC TATTGTCAGG GCGATGGAAC GGGTTAACCG CGATGGACGA 
GCAGAAGTTA TGATATTAGC TAGGGGTGGG GGTTCAGTGG AAGATTTATC CTGTTTTAAT 
GATGAACGAG TTGTCCGGGC GATCGCTTTA AGTCAAATTC CGGTTATAAC AGGTATTGGG 
CATCAACGAG ATGAATCTTT AGCTGATTTA GTGGCGGATG TGAGTGTACA TACCCCTACG 
GCAGCAGCAG AAAGAGTTGT TCCGGATTAT AATCAATTAG TGATCGACCA TCAACAGCGA 
GTCAATCGAA TTATTGACAG TGTTCGAGAA AGATTGCAAC AAGAGTCGAA TTATTTAGAC 
CAATTACACA GTCGTTTAAC TCAACTTCCC ACTACTTCTC GGTACTTAGC ACAAATGACC 
GCTAAATGTC AACTCTTGAA ACAAAAATTA ATCGCCCTTG ATCCCCAAGA AGTTTTAAAA 
AGAGGGTATG CAGTGGTGAG AAAGAGGGAT GAGAAAATTA TACGGACAAC GGATGAATTA 
GTCCCAGAGC AAGAATTGAC TATACAATTA GGTCAAGGGT TTTTTAAAGT CAAGGTGACA 
GACATTTTAT CTTAA 

 

Protein sequence

MSITFSETAL SVSGLTTYIQ DLLEGDEQLQ QVWVTGEVSS LNDHPRGLFF TLSDPQVEAA 
VNCVVWNSQR LRLVEEPKVG AQILVLGSIR LYAKRGDYRL TVFQVLAVGE GLQALRYQQL 
RSRLQAEGLF DHERKRLLPL HPQTIAVVTS PTAAAWGDIQ RTLSQRYPGL HLLFSPATVQ 
GEEAPPSIVR AMERVNRDGR AEVMILARGG GSVEDLSCFN DERVVRAIAL SQIPVITGIG 
HQRDESLADL VADVSVHTPT AAAERVVPDY NQLVIDHQQR VNRIIDSVRE RLQQESNYLD 
QLHSRLTQLP TTSRYLAQMT AKCQLLKQKL IALDPQEVLK RGYAVVRKRD EKIIRTTDEL 
VPEQELTIQL GQGFFKVKVT DILS