Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_0246 |
Symbol | |
ID | 7110490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 273059 |
End bp | 273841 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643478521 |
Product | pentapeptide repeat protein |
Protein accession | YP_002375582 |
Protein GI | 218437253 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.161553 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAACA AAGAACAATT TGAGCTTTTA ACTAAAAATG TAGCTCTTTG GAATCAATGG CGAAGCAAAC ATCCTTGGAT TATTCCCGAT CTTGAAGGGG CTAATCTCGC AGAAATTAAT TTAAGTAATG CTAATCTATG TGAAGCTAAC TTAAATGAAG CGAAGTTAAA TGGGACTAAT TTACACAAAG CCCTCTTAAG AAAAGCTAAT TTACATAAAG CGAAGTTAAA TGGAGCTAAT TTAATTGAAA CTGATTTGAC TCAGGCGGAT TTATCTCAGG CGGTTTTAAC TGGTGCTAAT TTGACTCAGG CTTATTTGTG TTTTGCTAAT CTTACTGAGG CAGATTTAGT CAATGCTAAT TTAACAAGAG CTTATCTCTG TGAAAGTTGC TTAAATCAGG CTAAATTAGA CAATGCTAAC CTTTTTCAAG CCGATCTTCA ACAAGCTAGG ATTATTAAAG CTCAGTTAAG TCAGGCAAAT TTAGAACAAG CTAATCTCAC TCAAGCTATT ATTACTGATA TTATTGCTTT GGCGACTAAT TTTAGAGGAG CTAAGTTGAG CAATTCTACT CTTTTAAATT GGGTAATCGA TCAAGAAACT AAGTTAGACA ATAAGCTTCC CCATAATAGT CAAAACTTAT TATTATTCCC AAAACCCGAA AAAACCCCCC AGACTTCGGG TTGGAGTCAT TCAGAAAAAG TCACTCCCCA ACCTGCTCAA AATTCTCAGC ACTCAACTCA AGACCAGTTA AAAACCGCTA AATTAAAAAG TATTTTCGGT TAG
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Protein sequence | MANKEQFELL TKNVALWNQW RSKHPWIIPD LEGANLAEIN LSNANLCEAN LNEAKLNGTN LHKALLRKAN LHKAKLNGAN LIETDLTQAD LSQAVLTGAN LTQAYLCFAN LTEADLVNAN LTRAYLCESC LNQAKLDNAN LFQADLQQAR IIKAQLSQAN LEQANLTQAI ITDIIALATN FRGAKLSNST LLNWVIDQET KLDNKLPHNS QNLLLFPKPE KTPQTSGWSH SEKVTPQPAQ NSQHSTQDQL KTAKLKSIFG
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