Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_0240 |
Symbol | |
ID | 7110484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 264899 |
End bp | 267181 |
Gene Length | 2283 bp |
Protein Length | 760 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643478515 |
Product | lipopolysaccharide biosynthesis protein |
Protein accession | YP_002375576 |
Protein GI | 218437247 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.0345486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAACTA ACTTTAATAA GTTGTCAGTG AATGACCAAT TCCAGGAATT TCCATCCGAA GAGCTAGAGG AAAGTAGCGC ATCAAGTAAA GGAGGGACAA ACTTTAAGCC CTACTTACGC ACTTTGATAC GTAAAGCTTG GCTGGTGCTG GGATTAACTA CCCTCGGAAC GAGTGCGGCT TTGTTCTGGA ATGCTCAAGC TCCTAATATG TACACAGGCA ATTTTTATCT TTTGGTAGAG CCGATTACCC CCTTCAGTAA GGTGAGCGAT CCATCGACCA TTGCTCGTAC AGGGGGAGTG CCAAGAGATG ATTTATTCTC TCTGGACTAT CCGACCAATT TGGCCTTTTT ACAGAGTCCA GGGATGACTT TTCAATTGGC TCAGGATGTT CACCAAAAGA AACCCACCCG CTCAGTTCCG GCAATCTGGC AAGATCTCAG GAAAAATCTT GTGGTTGAAC GAGTGGGAAG AACACCCACC ACAGCTACTA AAATTTTTGC AGTCACTTAC AAAGGAGAAG ATCCACAGGA AGTCAAAGCG GTCTTAGAAG TCGCTGCGGA TACATTTTTA AATTACAGTG TCGAAGACCG AGAAACTAGC CTAAAAGCTG GGGTAAAATT TATCGCTGAA CAGCTACCGG CTTTACAAGA AAGATTAAAA AAACTCCAAT CAGAGCAAGA GAGACTTCGC CAACAATACG ATCTAATCAA TCCTACAACA AAAGGGCAGG AAGTTCTCAC TCAACTAAGT AACATTGAGC AGCAACTCCT AGACGTTCAA ACTGAACTTA AAGCTCAACA ATCTCTTTAT CAAACCCTAA GAGGGCAACT CAATTTTACC CCTGAGGAAG CCTTAGCTGC TGCTTCTTTG AGCCAAGATC CGACTCGATT ACCATTGCTG ACTCAACTTC AGCAAATTGA AAGTCAAATT GCGATTGAAT CAAGCAAATT TACCCCCGAA AATCCGACTC TCAAAGCATT AGAAGAGCAA AGGCAAAATC TATCAAACTT GTTGGATCAA ACCACCCAAG AAATAATACA ACAAAATTCA ATTATCACAC CCGGAAATTC AGACATTCTC AACCATCAAG ATCCAACCCG TTTGCAACTG ATTAATCAAC TGGTACAAAC CAATAATCAA ATTCAACAGT TAGAAGTGCG TTATCAGTCT CTCCAACAGA CTAAAGCGAG GTGGGAACAA CAAGCCAAAC TGTATCCGGC GGTTATTCGT CAGTATGAAG ACTTAGATAG ACAAATTACC CTCACCAGCC AAATTTTAGA CCGCCTTTTG ACTCAGCGAG AAACTTTAAA AGTAGAATCA GCCCAAGAAC TTCCTTGGCA ATTAATCTCC CCTCCACAAA TTCCTCTGGA TGCAGAAGGA AAACCTGTGG CTGAACCCCC AGATCCTAAA AAGAAATTAG CAGCAGGATT GATGGGAGGA TTGCTCCTAG GGGCAGCAAT TGCTTTTTTA TGGGAAAAAC AAAGAAATAT TTTTTACGGG GTCGAAGATC TCAAGGATGC TTTTTCCCTT CCAGTGCTGG GCAATATTCC TTGGGATAAC GCTTCCGACA GTGTTCCCGG CTTGACTAAA CCTTTAGAGG GCAAATCAGC CGACAGTGAG TCAGAGATAG ATCCTCATGT TATCCACTCT CTGAATAACC GGGGAGTTTT ATTCTTAAAT GCTTTCGATT TACTCTACAG CGAACTGTCT TTTCTTTATA ACCATCCTCC ACTCCACTCC CTTGTGGTTT CTTCTGTACA AGCTCAGGAT GGTCAAACTA CAATTGCCCT CTACCTAGCT AAAGCAGCAG CAGCAACGGG TAAACGAGTA TTGTTAGTAG ATACCAATTT AGCTAGTCCT CAACTTCATT CTTGGTTCAA TTTACCCAAT TATAAAGGAC TAAGCGATCT TTTAATGGAT GAGGAATTGG CTTCCTATGA TGTCATTCAG CCTTCACAGG AAATTGATAA TTTATTTGTT TTATCAGCCG GTTCTGCTCA AGCTCCTGCT TCTAAACTCC TATGGTTTCC GAGGATGCAG AGTTTAATGA GAGAATTAAA AGTTAGATAT GATTTAATTA TTTATGATGC TCCTCATTTC TATGAATCAA CGGACATCGG TTTTCTAGGA GCGCAAACTG ATGGGATTGT TATGGTGGTA GGAATCGGTA AAACTCCTCC CTATCTAGTT AAACAAGCTG TTGAGGAAAT TAATAAATTA CGATTACCCC TTTTAGGCTT AGTGGCTAAT CATACTTTAC CCGCTCCCAT TGGGTTCTTT TAA
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Protein sequence | MVTNFNKLSV NDQFQEFPSE ELEESSASSK GGTNFKPYLR TLIRKAWLVL GLTTLGTSAA LFWNAQAPNM YTGNFYLLVE PITPFSKVSD PSTIARTGGV PRDDLFSLDY PTNLAFLQSP GMTFQLAQDV HQKKPTRSVP AIWQDLRKNL VVERVGRTPT TATKIFAVTY KGEDPQEVKA VLEVAADTFL NYSVEDRETS LKAGVKFIAE QLPALQERLK KLQSEQERLR QQYDLINPTT KGQEVLTQLS NIEQQLLDVQ TELKAQQSLY QTLRGQLNFT PEEALAAASL SQDPTRLPLL TQLQQIESQI AIESSKFTPE NPTLKALEEQ RQNLSNLLDQ TTQEIIQQNS IITPGNSDIL NHQDPTRLQL INQLVQTNNQ IQQLEVRYQS LQQTKARWEQ QAKLYPAVIR QYEDLDRQIT LTSQILDRLL TQRETLKVES AQELPWQLIS PPQIPLDAEG KPVAEPPDPK KKLAAGLMGG LLLGAAIAFL WEKQRNIFYG VEDLKDAFSL PVLGNIPWDN ASDSVPGLTK PLEGKSADSE SEIDPHVIHS LNNRGVLFLN AFDLLYSELS FLYNHPPLHS LVVSSVQAQD GQTTIALYLA KAAAATGKRV LLVDTNLASP QLHSWFNLPN YKGLSDLLMD EELASYDVIQ PSQEIDNLFV LSAGSAQAPA SKLLWFPRMQ SLMRELKVRY DLIIYDAPHF YESTDIGFLG AQTDGIVMVV GIGKTPPYLV KQAVEEINKL RLPLLGLVAN HTLPAPIGFF
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