Gene PCC7424_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0227 
Symbol 
ID7110471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand+ 
Start bp246501 
End bp247487 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content39% 
IMG OID643478502 
Productputative lipid kinase 
Protein accessionYP_002375563 
Protein GI218437234 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 
TIGRFAM ID[TIGR00147] lipid kinase, YegS/Rv2252/BmrU family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.535184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACTC AAATTTTTTC TCAACCGAAA ACGATTCTTA AACGAGTTAA GGCTTTTCAA 
TCCGCTTGCT TGATTTTTAA TCCAGTTTCA GGTCAAAATA ATCCTCAACA TGACTTAGAA 
ATTATTCAAA CTTTTCTACA ACCTTACCTT AACCTTGACA TTTATTTAAC CAGTCTAGAA 
AAAGGTGCTG ATCAACTGGC TCAAGAAGCC GTACAACGAG GAGTAGAATT ATTAATTGCA 
TCGGGAGGAG ATGGCACAGT TTCCGCCGTA GCTAAAGCCG CCATCGGAAC GGGTATTCCT 
TTAGCAATTA TACCTCGCGG AACGGCTAAC GCTTTTGCCA ATGGATTAGG ATTACCCCTT 
ACCCTAGAAG AGTCTTGTCT TGCTATTTTA CAAGGTGCAA TGCTAACGGT AGACACGGCT 
CTATGTAATA ATCAACCCAT GTTATTATTA GCTGGTATTG GTTTTGAAGC AAACACCGTT 
AAAGAAGCCG ATCGCCAGTT AAAAGATCAC TTTGGGATTT TTGCTTATAT TTTAGCCGGA 
CTCGACCAAC TGAAAAACCT AGAAAATTTT GAGGTAACCT TAGAAACAGA ATGCTTAAAA 
ATTACTGTCA ATGCAAGTGC CATAACCGTT GCTAATTTTG CTCCGCCCAC CTCAATTTTA 
GCTCAAGGAA TCGGTTCAAA TCGTCCTGAC GATGGCTTAC TCGATGTAAC CATTATTGCT 
CCTTTAAATG CGTTAGAGGC TTTATCTCAA GCTATAGAAC TATTTGAATG TGGTATAGCT 
CACTCCAACA CGGAAAATAA TCATATCGGA TATTTACGAG TTCAAAAAAT TAATATTACT 
ACTAATCCTC CTCAACCGAT CACATTAGAT GGGGAAATGA TCGAGGGAGA TTCAATAATT 
TTTGAAGTGA TTCCGGCTAG TTTAAAAGTC GTTGCCTCTT ATCAAAAGGT GATGGCTTCT 
CAAGAAAAAA TTAGTCGGCT TGCCTAA
 
Protein sequence
MFTQIFSQPK TILKRVKAFQ SACLIFNPVS GQNNPQHDLE IIQTFLQPYL NLDIYLTSLE 
KGADQLAQEA VQRGVELLIA SGGDGTVSAV AKAAIGTGIP LAIIPRGTAN AFANGLGLPL 
TLEESCLAIL QGAMLTVDTA LCNNQPMLLL AGIGFEANTV KEADRQLKDH FGIFAYILAG 
LDQLKNLENF EVTLETECLK ITVNASAITV ANFAPPTSIL AQGIGSNRPD DGLLDVTIIA 
PLNALEALSQ AIELFECGIA HSNTENNHIG YLRVQKINIT TNPPQPITLD GEMIEGDSII 
FEVIPASLKV VASYQKVMAS QEKISRLA