Gene PCC7424_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0175 
Symbol 
ID7110261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp192418 
End bp192888 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content41% 
IMG OID643478452 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_002375513 
Protein GI218437184 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.723088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGACT CAACCCTTGA CAAATTACTC CAAGACCTCA AAGATCAAAA TGAAGCCGTT 
CGAGATGCAG CCACTGCCGA ACTTTGGCGA ATCTGGTTCA CACAAAAAGG AGAATTAGGC
TTAGAACTTC TGAACCGGGC ACAATTTCTC CTAGAAATGG GTCAATCAGA TCAAGCAGAG
GCTACTTTAA CTCAAATTAT TCATAATTAT CCCGATTTTG CTGAAGCCTG GAATCGCCGG
GCTGTCCTTT ATTATCTTCA AAAATGCTAC GAACAATCTA AACAAGATTG TGAACAAGTA
ATTCGCTTAA ATCCTCATCA TTTTGGGGCT TGGCATGGAT TAGGATTATG TCAGGCGGCT
TTAGGCAATT ATACAAAAGC GATAGAAGCC TTCCGCAAAG CATTAGATAT ACAACCTTAT
GCGCTAATTA ATCAAAAGCT AATCCTCGAA TGTACAGCCA TGATGAGTTA A
 
Protein sequence
MDDSTLDKLL QDLKDQNEAV RDAATAELWR IWFTQKGELG LELLNRAQFL LEMGQSDQAE 
ATLTQIIHNY PDFAEAWNRR AVLYYLQKCY EQSKQDCEQV IRLNPHHFGA WHGLGLCQAA
LGNYTKAIEA FRKALDIQPY ALINQKLILE CTAMMS