Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC7424_0175 |
Symbol | |
ID | 7110261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7424 |
Kingdom | Bacteria |
Replicon accession | NC_011729 |
Strand | + |
Start bp | 192418 |
End bp | 192888 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643478452 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_002375513 |
Protein GI | 218437184 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.723088 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATGACT CAACCCTTGA CAAATTACTC CAAGACCTCA AAGATCAAAA TGAAGCCGTT CGAGATGCAG CCACTGCCGA ACTTTGGCGA ATCTGGTTCA CACAAAAAGG AGAATTAGGC TTAGAACTTC TGAACCGGGC ACAATTTCTC CTAGAAATGG GTCAATCAGA TCAAGCAGAG GCTACTTTAA CTCAAATTAT TCATAATTAT CCCGATTTTG CTGAAGCCTG GAATCGCCGG GCTGTCCTTT ATTATCTTCA AAAATGCTAC GAACAATCTA AACAAGATTG TGAACAAGTA ATTCGCTTAA ATCCTCATCA TTTTGGGGCT TGGCATGGAT TAGGATTATG TCAGGCGGCT TTAGGCAATT ATACAAAAGC GATAGAAGCC TTCCGCAAAG CATTAGATAT ACAACCTTAT GCGCTAATTA ATCAAAAGCT AATCCTCGAA TGTACAGCCA TGATGAGTTA A
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Protein sequence | MDDSTLDKLL QDLKDQNEAV RDAATAELWR IWFTQKGELG LELLNRAQFL LEMGQSDQAE ATLTQIIHNY PDFAEAWNRR AVLYYLQKCY EQSKQDCEQV IRLNPHHFGA WHGLGLCQAA LGNYTKAIEA FRKALDIQPY ALINQKLILE CTAMMS
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