Gene PCC7424_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0160 
Symbol 
ID7107928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp178503 
End bp178991 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content46% 
IMG OID643478437 
Productphycocyanin, alpha subunit 
Protein accessionYP_002375498 
Protein GI218437169 
COG category 
COG ID 
TIGRFAM ID[TIGR01338] phycocyanin, alpha subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.0148087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC CCTTGACCGA AGCCGTATCA GCCGCTGATT CTCAAGGCCG TTTCTTAAGC 
AGCACCGAAA TCCAAGTTGC TTTTGGTCGT TTTCGTCAAG CTAACGCTAG CTTACAAGCT
GCTAAAGCTC TGACTGAGAA GAAAGATCAA TTAGTAAACG GAGCAGCCCA AGCTGTTTAC
AACAAATTCC CTTACACCAC CCAAATGCAA GGGCCCAACT ATGCTGCTGA TCAGCGTGGT
AAAGACAAAT GCGCTCGTGA CATCGGCTAC TACTTACGGA TGGTAACCTA CTGTCTAGTT
GCTGGTGGAA CCGGCCCAAT GGACGAGTAC CTAATCGCTG GGATTGATGA AATCAATCGG
ACTTTTGAAT TATCTCCTAG CTGGTACATT GAAGCTCTCA AATACATCAA AGCTAATCAT
GGTTTAAGCG GCGACCCTGC TGTTGAAGCC AATTCTTACA TCGATTACGC AATCAATGCT
CTCAGCTAA
 
Protein sequence
MKTPLTEAVS AADSQGRFLS STEIQVAFGR FRQANASLQA AKALTEKKDQ LVNGAAQAVY 
NKFPYTTQMQ GPNYAADQRG KDKCARDIGY YLRMVTYCLV AGGTGPMDEY LIAGIDEINR
TFELSPSWYI EALKYIKANH GLSGDPAVEA NSYIDYAINA LS