Gene PCC7424_0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0159 
Symbol 
ID7107846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp177567 
End bp178385 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content43% 
IMG OID643478436 
ProductPhycobilisome linker polypeptide 
Protein accessionYP_002375497 
Protein GI218437168 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.00793211 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCAGTT TAAGCGCAGC CCAACGTTTA GGATTTGAGC CGTTTGTAGA ATCAGCCCCA 
GTAGAGTTAC GTCCCAATTG GACAGAAGAA GATGTAGAAG TCGTCATCCG TGCTGCATAC
CGCCAAGTTC TGGGAAATGA ACATTTAATG TCCAGAGACA GACTAACCAG TGCTGAGTCT
TTATTACGTA ACGGAGACAT TAGCGTTAAA GATTTCGTCA GAGCAATTGC CCAATCAGAA
CTTTATCAAA ACAAATTTTT TCATACTCTT CCCCAAAATC GGTTGATTGA GTTGAATTAT
AAGCATCTAT TGGGTCGTGC CCCTTACGAT CAGGCAGAAA TTGCTTATCA TACTGATCTT
TACAACCAAA AAGGCTACGA GGCGGAAATC AATTCCTATA TCGATTCTCC AGAGTATCAA
GAAAACTTTG GAGATCATAT CGTACCCTAT TATCGGGGAT TTGCGACTGG GCGGAATCAA
AAAACCGTAG GCTTTAGCCG CATCTTCCAA TTGTACCGGG GTTATGCCTC TAGCGATCGC
GCTTTAAGTC CTCAAAAAGC GAAATTAATG CGAGAAATCG CCCAAAATAC CGCATCTCCT
GTCTATATTG GCTCGACAGC CCAAGCCTTA TCCGGACTGT CTGGAGGGGA AAGAGGCAAA
TTTTATCGAA TTCGAGTCAT CGAAGGAGCT AAAGCCGGGC GTAAAACTAG AGTACGGATA
AGTAATAAAG AATATCTTGT TCCTTACGAG CAATTATCGA GCAAATTGCA AGAAATTAAT
CGTAAAGGGG CACAAGTCAC CAGCATCATC CCTGCATAA
 
Protein sequence
MTSLSAAQRL GFEPFVESAP VELRPNWTEE DVEVVIRAAY RQVLGNEHLM SRDRLTSAES 
LLRNGDISVK DFVRAIAQSE LYQNKFFHTL PQNRLIELNY KHLLGRAPYD QAEIAYHTDL
YNQKGYEAEI NSYIDSPEYQ ENFGDHIVPY YRGFATGRNQ KTVGFSRIFQ LYRGYASSDR
ALSPQKAKLM REIAQNTASP VYIGSTAQAL SGLSGGERGK FYRIRVIEGA KAGRKTRVRI
SNKEYLVPYE QLSSKLQEIN RKGAQVTSII PA