| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0158 |
|---|
| Symbol | |
|---|
| ID | 7107845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | - |
|---|
| Start bp | 176658 |
|---|
| End bp | 177533 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643478435 |
|---|
| Product | Phycobilisome linker polypeptide |
|---|
| Protein accession | YP_002375496 |
|---|
| Protein GI | 218437167 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.0115125 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTA CGACAGCAGC ATCTCGTTTA GGAACATCAG CCTTTAGCGA GGCTTCTCCG
GTTGAATTGC GTCCTAATTG GACAAAAGAA GATGCTCAAG GAATAATTCG CGCAGTTTAC
CGTCAGGTAC TCGGCAATGA TTACATTATG AAGAGTGAGC GTTTAAATAG TGCAGAATCT
CTTCTGTGTA ACGGAGTAAT TACAGTACGG GAATTTGTCC GGGCTGTAGC TAAATCAGAA
CTCTATAAGT CCAAGTTTTT CTACAACAAT TTTCAAACTA GAGTCATTGA ACTCAATTAT
AAACACCTGT TGGGACGCGC TCCCTATGAT GAGTCTGAGG TGATTTATCA TCTAGACTTA
TATGAAAATA AAGGATATGA AGCAGACATC GATTCCTATA TTGATTCTGT GGAATATCAG
GAAAACTTTG GGGATAATAT TGTTCCTTAT TATCGCGGTT TTGCTACTCA AACCGGTCAA
AAAACCGTTG GGTTTACCCG GATGTTCCGT CTTTATCGGG GTTATGCTAA CAGTGATCGC
GCTCAGATTG AGAAAAATTC TCCTCGTTTA GCGGTTGAAT TAGCTCAAAA CGCCTCTTCT
GCCGTAGTCG GGCCTTCTGG CGGGAGCGAA GGTTGGGCTT ATCGTCCTTC TAAAATTGGC
ACAACTCCTA ATAAAGCTTT AGGGGGAACT GTACCTTTTG GAACTGATCG TAAAGCCTAT
CGAGTTGAAA TTGCAGGAAT TGTTAATCCT CGTTATCCTC GGGTACGTCG CAGCAATAAA
GCGATTATTG TCCCTTACGA AGAGTTAAAC AATACTTTGC AACAGATCAA TAAACTCGGT
GGCAAAGTCG CTAGCATTAC TCCAGCAAGT CTGTAA
|
|---|
| Protein sequence | MAITTAASRL GTSAFSEASP VELRPNWTKE DAQGIIRAVY RQVLGNDYIM KSERLNSAES
LLCNGVITVR EFVRAVAKSE LYKSKFFYNN FQTRVIELNY KHLLGRAPYD ESEVIYHLDL
YENKGYEADI DSYIDSVEYQ ENFGDNIVPY YRGFATQTGQ KTVGFTRMFR LYRGYANSDR
AQIEKNSPRL AVELAQNASS AVVGPSGGSE GWAYRPSKIG TTPNKALGGT VPFGTDRKAY
RVEIAGIVNP RYPRVRRSNK AIIVPYEELN NTLQQINKLG GKVASITPAS L
|
|---|
| |