Gene PCC7424_0074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_0074 
Symbol 
ID7112272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp87568 
End bp88995 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content39% 
IMG OID643478352 
ProductDeoxyribodipyrimidine photo-lyase 
Protein accessionYP_002375414 
Protein GI218437085 
COG category[L] Replication, recombination and repair 
COG ID[COG0415] Deoxyribodipyrimidine photolyase 
TIGRFAM ID[TIGR03556] deoxyribodipyrimidine photo-lyase, 8-HDF type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGATT TAATTCTCTT TTGGCATCGC CGAGATTTAA GAATTAGTGA TAATATCGGT 
CTGAGTACAG CACGACAAAG AAGTCCTCAT GTTGTCGGGA TTTTTTGTTT AGATCCAGAT
ATTTTAGAGA AAGATGATGT TGCTCCGGCT AGGGTGACTT ACCTAATCGG TTGTTTACAG
GAATTGCAAC AAAACTACCA GCAAGCAGGA AGTCAATTAT TAATTCTCAA GGGTAAACCG
AGCCAAGCTA TTCCCATCTT AGCAGAAAGT CTCAAAGCTC AAGCGGTTTT TTGGAATTTA
GATGTAGAAC CTTATGCACA AACAAGAGAC GAACAAGTCA GCAATGCTTT ACAAGAAAAA
GGAATTGCTA CAGAGAAATT TTGGGATCAA TTACTTCATG CACCAGGGAA AATATTAACC
CTATCGAAAG AGCCATATAA AGTTTATACC CCTTTTTGGA GAAACTGGAG TCAGGAACTT
AAAAAATCTC CCGTTCAAGC CTTAGAAGAT GTTCAAGGGT TAAATCAACA ACAGATCTCT
TTAGCAAAAG AAGCGGGAAT AATTGACTTA CCCACCGCCA AAGATTTAGG GTATCTATGG
GAAAATCCTC TCATGTTAAA TCCCGGAGAA ACCGCCGCTA AAGAAAGATT ACAAGAGTTT
TGTAAAACGT CAATTAATAA TTATCAAGAA CAAAGAGATT TACCCGCAAT TGATGGAACA
TCTCGCCTCA GTGCTGCCTT AAAATTTGGG GCTATTGGTA TCCGTACTGT GTGGCAAGCT
ACCCTTGAAC TATACGAAAA TAGCAGAAGT GATGAAGTCA GAGAAAGTAT TCAAACTTGG
CAACAAGAGT TAGCTTGGAG AGAATTTTAT CAGCATTGTA TGTATTTTTT CCCTGAGTTG
GCAGACGGCC CTTATCGAAA GGAATTTAGA GAGTTTCCTT GGGATAATGA TGAGGATCTT
TTTCAAGCTT GGTGTGAGGG AAAAACGGGT TATCCTATTG TTGATGCTGC CATGCGTCAA
TTAAATGAAA CCGGTTGGAT GCACAACCGT TGTCGGATGA TTGTGGCTAG TTTTTTAACT
AAAGATTTAA TCATTAATTG GCAGTGGGGA GAAAAATATT TTATGCAGAA GTTATATGAT
GGCGATTTAT CAGCTAATAA TGGGGGTTGG CAATGGAGCG CTTCTAGTGG GATGGACCCT
AAACCGTTAC GAATTTTTAA TCCGGCGAGT CAATCACAAA AATATGATCC AGATGGGGAA
TATATTCGTC AATGGATACC TGAATTAAAG TCTTTAGATA CAGAATATTT AGTAACCGGA
AAAATTCCTA CATCAGAACT TCGTCAATGT GGGTATCCTG AGCCTATTGT TGATCATAAA
AAACGCCAAG CTGAGTTTAA GCAGCGCTAT AAAGAAGTTA AAGGATAA
 
Protein sequence
MSDLILFWHR RDLRISDNIG LSTARQRSPH VVGIFCLDPD ILEKDDVAPA RVTYLIGCLQ 
ELQQNYQQAG SQLLILKGKP SQAIPILAES LKAQAVFWNL DVEPYAQTRD EQVSNALQEK
GIATEKFWDQ LLHAPGKILT LSKEPYKVYT PFWRNWSQEL KKSPVQALED VQGLNQQQIS
LAKEAGIIDL PTAKDLGYLW ENPLMLNPGE TAAKERLQEF CKTSINNYQE QRDLPAIDGT
SRLSAALKFG AIGIRTVWQA TLELYENSRS DEVRESIQTW QQELAWREFY QHCMYFFPEL
ADGPYRKEFR EFPWDNDEDL FQAWCEGKTG YPIVDAAMRQ LNETGWMHNR CRMIVASFLT
KDLIINWQWG EKYFMQKLYD GDLSANNGGW QWSASSGMDP KPLRIFNPAS QSQKYDPDGE
YIRQWIPELK SLDTEYLVTG KIPTSELRQC GYPEPIVDHK KRQAEFKQRY KEVKG