| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0042 |
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| Symbol | |
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| ID | 7112240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011729 |
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| Strand | + |
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| Start bp | 52010 |
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| End bp | 53947 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643478321 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_002375383 |
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| Protein GI | 218437054 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.754542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAGC AAATTATCAT CGCGGAGCAG CATCATCTAG CCGCCGTATT CTGGGAAGAT
CAAATTCAAG AATTAGTCGT TGCGACAGGC AACCAACAAG TAGGAGACAT ATATTTAGGA
TTAGTAGAAA ATGTAATTCC TGGAATCGAT GCAGCATTTG TTAATATTGG AGATGCAGAA
CGCAATGGAT TTATTCACGT CACAGATTTA GGGCCTTTAC GACTGAAAAA AACCGCCGGA
GCGATCACGG ATTTATTAGC ACCTCAACAA AAAGTGCTAG TTCAAGTGAT GAAAGAACCT
ACCGGCAATA AAGGGCCTCG TTTAACCGGT AATATTACCT TACCCGGACG CTATTTAGTC
CTGATGCCCT ATGGGAGAGG GGTCAACCTA TCTCGGCGGA TTAGAAATGA TGATGAACGC
AGTCGTTTAA GAGCATTAGC GATTTTAGTT AAACCGTCAG GAATGGGGTT ATTAGTTCGC
ACTGAAGCTG AAGGAAAAGC CGAAGAAGCG ATTATCGAAG ATTTAGAAAC CCTGCAAAAG
CAATGGGAAC TGATCCAACA ACAAGCCGCG TCTACTCGTC CCCCGGCTTT ATTAAATCGA
GATGACGACT TCATTCAACG AGTGTTACGG GATATGTACA CTTCCGATGT CAATCGCATT
GTGGTTGATA ATCCCAACTC TGTCAAGCGT GTTAAACAGC ATTTGATGGG TTGGAGTGGC
GGGCGATCGC CGGAAGGGGT AGTGATTGAC CATCATCGAG AATCTCAATC GGTTTTAGAT
TATTTTCGCG TTAACGCCGC CATTCGAGAA GCCCTGAAAC CGAGAGTAGA TTTACCGTCA
GGAGGGTATA TTATCATTGA GCCAACGGAA GCGTTAACGG TGATTGATGT TAACTCCGGT
TCTTTTACCC GTTCGGCTAC ATCTAGAGAA ACCGTGTTAT GGACAAATAG CGAAGCCGCC
ACAGAAATTG CCCGTCAATT GCGCTTGAGG AATATTGGAG GGGTGATTGT CGTCGATTTT
ATTGATATGG ACTCACGACG AGATCAACTC AAACTCCTAG AACATTTTAA TAAAGCCCTA
AAAGCGGATA AAGCGAGACC CCAAATTGCC CAACTTTCCG AATTGGGTTT AGTCGAATTA
ACCCGCAAAC GTCAAGGAAA AAATATTTAT GAACTCTTTG GTCAACCTTG TCACACCTGT
GGTGGGTTAG GTCATTTAGT CCATCTCCCC GGCGAATCAA ATGCGATTAG TTTAGAAACC
TCGTCTTTTT CTACCCCTGC GATCGCTACC CCTCGACTCC CCGAAAAACC CATTATTGAA
CCAGAACCGG TTTATGAGGC AGGATTTGAT GAGGTAGATG AAGGGTCTCA ACATTTAGAT
CTGTTATATC ATCCCAATTA TCAAGACCAA GGGCTTGCCC GTCGTCGTCG TCGCCGTCGT
TCTAATGATT TGGTTAAGGA AGAAACTGGC ACAAAAATTC TCCCTGGGAT TCCTGAAAGA
GAGCTAGATG TAGAGTATGA ATCTCCTAGA GAAGATAGAA GAGACCGCAG TCTTAGAAAT
CAAAGACGAG ATGAAATGTC TCTAGAAAGG GTATCGGTGG AGATGTCAGA TTTAGAGCAA
AATGTCTATT CAGAAATGGG CATTTCTCCT TTAATTCTTT TAGAGAAAGA ATTTAAAGAT
CCCAGAAGTG TGATAGTTTC TGTCAAACCG AAAAATAATT CCGATCGAGA GTCTTTGACT
TCTAATGAGT CTTCTATATT TGAAGAGGAA GAGGAAACAG AATCAATGAC TTATTCAGAA
AGAAATGGAA CACCACAGGA GGATTTATCC CTGTCTGAGT CAGATCATGA TAATTCTGAG
TCTGAATCTG ACTCTGAAAC CGATCGTCCG ATTATTCGTC GTCGTCGTCG TCGTTCGTCT
GCTTCGAGTG GGGAATAA
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| Protein sequence | MPKQIIIAEQ HHLAAVFWED QIQELVVATG NQQVGDIYLG LVENVIPGID AAFVNIGDAE
RNGFIHVTDL GPLRLKKTAG AITDLLAPQQ KVLVQVMKEP TGNKGPRLTG NITLPGRYLV
LMPYGRGVNL SRRIRNDDER SRLRALAILV KPSGMGLLVR TEAEGKAEEA IIEDLETLQK
QWELIQQQAA STRPPALLNR DDDFIQRVLR DMYTSDVNRI VVDNPNSVKR VKQHLMGWSG
GRSPEGVVID HHRESQSVLD YFRVNAAIRE ALKPRVDLPS GGYIIIEPTE ALTVIDVNSG
SFTRSATSRE TVLWTNSEAA TEIARQLRLR NIGGVIVVDF IDMDSRRDQL KLLEHFNKAL
KADKARPQIA QLSELGLVEL TRKRQGKNIY ELFGQPCHTC GGLGHLVHLP GESNAISLET
SSFSTPAIAT PRLPEKPIIE PEPVYEAGFD EVDEGSQHLD LLYHPNYQDQ GLARRRRRRR
SNDLVKEETG TKILPGIPER ELDVEYESPR EDRRDRSLRN QRRDEMSLER VSVEMSDLEQ
NVYSEMGISP LILLEKEFKD PRSVIVSVKP KNNSDRESLT SNESSIFEEE EETESMTYSE
RNGTPQEDLS LSESDHDNSE SESDSETDRP IIRRRRRRSS ASSGE
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