| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC7424_0020 |
|---|
| Symbol | |
|---|
| ID | 7112218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011729 |
|---|
| Strand | + |
|---|
| Start bp | 23061 |
|---|
| End bp | 24707 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 643478300 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002375362 |
|---|
| Protein GI | 218437033 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTAA AAAATAGGCT CAAGAAAGCC TATTTAAATA TTTTATTAGT CATCATTACT
CTGAGCATCA TAGGATTATC TACAGTTAAT CATTATGGCG CAACTTGGGA TGAATGGATA
GAAATTTACA TGGTTAAATG GGTTCGTGAA TATATTAACG AAGGTAAACC GATAGAAAGA
GATTCAGAAT ATTATGGATT TATTTTTAAC TATACGGCAG ATCAATTCTA TGATATCTCC
AGAAATTTAG GATTTTTTAA GTCTGATCAA CAATATGATA ACTTAACTGA ATATCACCAA
AATAATATTA AACTCCGCCG AAAAATTCAA GTTAAACATA TTTTTACTTT TATTTTTTCT
TTATTGACTT ATATTTCTGT AGCTGGAATT GTCGCTATCT TGACAAGTTG GGAATATGGA
TGGTTTGCTC CTATCGTTTT AGCGTTGTTT CCTCAATTTT GGGGTCATAG TTTTTTTAAT
CCCAAAGATA TTCCTTTTGC TGCTATGTTT ACTTTAGCAG TTTGGGCAGG AGCTTGTTTA
CTCAATTATT ACTATCAAAT AGACTCAAAA CATCAGAAAA TAGGACGTAA TAAAATTACC
CTTTATTCCT TGCTCTATGG TTCTCTTGTC GGTTTGGTGA CCGGCGTTAG AGTGGGAGGA
TTTTTAATGA TATTTTTCTT GCTCGCGGCT CATTTATTAA CTCAATTAAA TCCTAAAATA
ATTTTTCATA AAATATCTAA TTTTTTTAAG TTTTATCTGT TAATCATTGT AGCTTGGTTT
TTAATTACGA CTCTAACTTA CCCCGCCTCT TGGTCTAATC CTTTTCAATG GTTTTTTGAA
GCTATAGAAA ACTTTTCTAA ATATAGTCTT TGGGATAACT CAGTTTTATT TGATGGTCAA
TTTATTCCCG GTAAATCTCT ACCTTGGTAT TATTTGCCTA GGCTTTTAAA TATTACTATC
CCTCTCATTT TTCAAATTAC TTTTTTGATT GGAATTATCG GGATAATTAT TAAGTATCGA
AACTGGAGTG AAACTAAGAG AGCTTGTGCA ATTTTAGTCC TATTACAACT GTTTTTTATT
CCCACAGTCG CTATCATAAA ACAATCGACT ATCTATGATG GAATCAGACA TTTTTTATTT
ATCATTCCCC CTATAGCTGT AATTTCCACT CTCGGTTTTA TCTGGCTCTA TCAAAACCTA
AAAAATAAAT TCTTAAAAAT ATTTGCTTCA ACTTTACTCA TTATCCAATT CAGTTTAATT
TTTTTGGATA TGGTAGCGTT ACATCCCTAT CAATATACCT ATTTTAATCG AATTTACGGA
GGATTAGCGG CGGCTTATGA GCAACAAGAA ACTGATTATT GGGGATTAAG TCTAAAAGAG
GGAATGGAAT GGCTCAATAA AAATGCAGAA CCTAATTCTA CTATTGTAGT AGCCGGCCCA
ACCTTTGCAG CAGAAATTTA TGCTGATCCT TATCAAAATT TCCAAATGAT TAATCGAGAT
CAATTTGATA GGAGTAAAGC ACCTAATTCA TATTATTATA TGGCCATTCC TCGTTATGAT
TATCAGCAAG CTTTTCCAGA ATGTCCCGTC ATTTACTCAG TCACTCGTCA AAATACTCCT
CTTACTATCA TAAAACAATG TCAATAA
|
|---|
| Protein sequence | MILKNRLKKA YLNILLVIIT LSIIGLSTVN HYGATWDEWI EIYMVKWVRE YINEGKPIER
DSEYYGFIFN YTADQFYDIS RNLGFFKSDQ QYDNLTEYHQ NNIKLRRKIQ VKHIFTFIFS
LLTYISVAGI VAILTSWEYG WFAPIVLALF PQFWGHSFFN PKDIPFAAMF TLAVWAGACL
LNYYYQIDSK HQKIGRNKIT LYSLLYGSLV GLVTGVRVGG FLMIFFLLAA HLLTQLNPKI
IFHKISNFFK FYLLIIVAWF LITTLTYPAS WSNPFQWFFE AIENFSKYSL WDNSVLFDGQ
FIPGKSLPWY YLPRLLNITI PLIFQITFLI GIIGIIIKYR NWSETKRACA ILVLLQLFFI
PTVAIIKQST IYDGIRHFLF IIPPIAVIST LGFIWLYQNL KNKFLKIFAS TLLIIQFSLI
FLDMVALHPY QYTYFNRIYG GLAAAYEQQE TDYWGLSLKE GMEWLNKNAE PNSTIVVAGP
TFAAEIYADP YQNFQMINRD QFDRSKAPNS YYYMAIPRYD YQQAFPECPV IYSVTRQNTP
LTIIKQCQ
|
|---|
| |