| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BbuZS7_0179 |
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| Symbol | trmE |
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| ID | 7106837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Borrelia burgdorferi ZS7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011728 |
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| Strand | - |
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| Start bp | 181105 |
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| End bp | 182499 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 643477610 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002374707 |
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| Protein GI | 218249887 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAAGT TTTTTGAGAG AGATGATGAT ATTGTAGCTC TTGCAACACC TTTTTTAAGT
AGTGCTTTAT GTGTGATTCG TAGCAGTGGT GCTTCTTCTA TATCTAAATT TTCTAAAATC
TTTTCAAATC ATTCAGCTCT CAATTCAGCA TCTGGGAATA CGATTCATTA CGGTTATATA
TTAGATAGTG AGAATGGTTG TAAGGTAGAT GAAGTTGTTG TTTGTTTATA TCGAGCACCA
AAAAGCTTTA CAGGGCAAGA TGCTATTGAA GTTATGGCTC ACGGTTCTGT GATTGGAATT
AAAAAAATTA TAGATTTGTT TTTAAAAAGT GGGTTTAGGA TGGCTGAACC TGGTGAATTT
ACTTTACGTG CATTTCTTGC TAAAAAAATT GATCTTACAA AGGCAGAGGC AATTCATGAG
ATTATTTTTG CCAAAACCAA TAAAACTTAT TCTCTTGCAG TTAATAAACT TTCTGGAGCT
TTGTTTGTTA AAATAGATGC AATAAAAAAA AGTATTTTAA ATTTTCTATC AGCTGTTAGT
GTTTATCTTG ATTATGAGGT TGATGATCAT GAGATTAGTA TTCCTTTTGA CTTAATTTTA
AGTAGCAAGG CTGAACTTAA AAAATTAATT AATTCTTATA AGGTTTATGA AAAAATTGAT
AATGGTGTTG CTTTGGTTTT AGCAGGTTCT GTTAATGCTG GAAAGTCGTC GTTATTTAAT
TTATTTCTCA AAAAAGATAG ATCAATTGTT TCTTCATATC CAGGCACTAC AAGAGATTAT
ATTGAGGCAA GTTTTGAGCT TGATGGTATT TTATTTAATC TTTTTGATAC AGCAGGACTA
AGAGATGCTG ACAATTTTGT TGAGAGATTG GGAATTGAGA AAAGTAACTC TTTAATAAAG
GAAGCATCTT TAGTGATTTA TGTGATCGAT GTTAGTTCAA ATTTAACAAA AGATGATTTC
TTATTTATTG ATTCAAATAA ATCTAATAGT AAAATATTGT TTGTTTTAAA TAAGATAGAT
TTAAAGATAA ATAAGTCCAC TGAAGAATTT GTTCGCTCAA AGGTTTTAAA TTCTTCAAAT
TTAATAATGA TTAGTACTAA AAATTTAGAA GGAATAGATA TTCTTTATGA CAAAATAAGG
GCTTTAATCT CTTATGAGAG AGTCGAGATT GGACTTGATG ATATAATAAT ATCATCAAAT
CGTCAGATGC AACTTTTGGA GAAAGCTTAT GCTTTGATTT TAGATTTACT TAGTAAAATT
GATCGCCAAG TAAGTTATGA TATGTTAGCA TTTGATGCTT ATGAGATTAT CAACTGTTTA
GGGGAAATAA CAGGAGAAGT TAGTAGTGAA GATGTTCTTG ATAATATGTT TAAGAATTTT
TGTTTGGGGA AATAA
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| Protein sequence | MSKFFERDDD IVALATPFLS SALCVIRSSG ASSISKFSKI FSNHSALNSA SGNTIHYGYI
LDSENGCKVD EVVVCLYRAP KSFTGQDAIE VMAHGSVIGI KKIIDLFLKS GFRMAEPGEF
TLRAFLAKKI DLTKAEAIHE IIFAKTNKTY SLAVNKLSGA LFVKIDAIKK SILNFLSAVS
VYLDYEVDDH EISIPFDLIL SSKAELKKLI NSYKVYEKID NGVALVLAGS VNAGKSSLFN
LFLKKDRSIV SSYPGTTRDY IEASFELDGI LFNLFDTAGL RDADNFVERL GIEKSNSLIK
EASLVIYVID VSSNLTKDDF LFIDSNKSNS KILFVLNKID LKINKSTEEF VRSKVLNSSN
LIMISTKNLE GIDILYDKIR ALISYERVEI GLDDIIISSN RQMQLLEKAY ALILDLLSKI
DRQVSYDMLA FDAYEIINCL GEITGEVSSE DVLDNMFKNF CLGK
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