Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BbuZS7_0018 |
Symbol | |
ID | 7106502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Borrelia burgdorferi ZS7 |
Kingdom | Bacteria |
Replicon accession | NC_011728 |
Strand | - |
Start bp | 16760 |
End bp | 17740 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 643477454 |
Product | ribosomal large subunit pseudouridine synthase D (rRNA-uridine isomerase D) |
Protein accession | YP_002374552 |
Protein GI | 218249610 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAGAG TTAAGAGAGA ATTTACCGTT AAAGAAAATG CTTTAAGATT GGATCTTTAC CTATCAGGCA ATTTTGAAGT TTTTACCAGA AGTCAGATCA AAAGAAGAAA TGTAGAAGCG TTTAAAAAGA GTAATGGTAA ATTTTTAAAG ATAAAATTAT CCAAGCCTGT TTTTAAAGAT GATGAAATAC TAATTGAATT TGACGAGGAG AGTAGTCAAA TTGATTGCCT TAGGCCGAGT AATATCCCTA TTGCTATAAT TTATGAAGAT TCCAATGTTA TTGTTTTGAA TAAACCACAA GGAATTTTGA GTCATCCTGG AATATCACAT TGGGATGATA CTGTAGTGAA TTTTCTTTTA TATCATATAA AAAGCTTGAA AATTAATTTT AATGAAGAAA AAATTAGACC CGGAATTGTT CATAGATTAG ATAAAGATAC CTCTGGAGTT CTAATTTGTG CAAAAAACAT TAGCACCTTA AGATTTTTAG CTCAGCAGTT TAAAGATAAA AGAATAAATA AAGTTTACAT TGCAATTGTT AAGGGTAATT TTAATAGTTT TTTTGGAAGC ATTGAATCTT TTATAGATAG AGATAAACAC AATAGGAAAA AATTTAGTGT TTCTAAAGAT AGAGGAAAAA AGGCATTAAC AGAATATAGA TTACTGCTCA ATTTTGGGGA ATATTCTCTT TTAGCTTTAA AGCCTAAAAC CGGCCGTACT CATCAATTGA GAGTTCATAT GAAATATCTT AATTTTCCAA TATTGGGAGA TGAGGTTTAT GGCAGAGTAG ATGGCAGTTT AAAAAAAATA ACGCTAATGC TTCATTCTTA TAAGCTTGAA ATTGATGTTG GAAAAAATTC TTTTAAGAAA TTTATTTCTG AATTTCCCAA AAGATTTGTT ATTTTTTTGT CAAATTTTTA CAAGAGTGAT GAATTAAATT TGATTATTGA TAATTTGGTT CTTTTTTTAA GAGATTTTTA A
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Protein sequence | MIRVKREFTV KENALRLDLY LSGNFEVFTR SQIKRRNVEA FKKSNGKFLK IKLSKPVFKD DEILIEFDEE SSQIDCLRPS NIPIAIIYED SNVIVLNKPQ GILSHPGISH WDDTVVNFLL YHIKSLKINF NEEKIRPGIV HRLDKDTSGV LICAKNISTL RFLAQQFKDK RINKVYIAIV KGNFNSFFGS IESFIDRDKH NRKKFSVSKD RGKKALTEYR LLLNFGEYSL LALKPKTGRT HQLRVHMKYL NFPILGDEVY GRVDGSLKKI TLMLHSYKLE IDVGKNSFKK FISEFPKRFV IFLSNFYKSD ELNLIIDNLV LFLRDF
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