| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_4560 |
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| Symbol | |
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| ID | 7106060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8801 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011727 |
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| Strand | + |
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| Start bp | 5342 |
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| End bp | 9799 |
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| Gene Length | 4458 bp |
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| Protein Length | 1485 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643477430 |
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| Product | YD repeat protein |
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| Protein accession | YP_002374528 |
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| Protein GI | 218249158 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAA CCCTTGAGGT TTTAGATTTT AATGATGTGG ATGCCCCTAT TATTAACTTC
CCTAGATTAG CGAATAATAC GATTACTTCC CCCATTGAAA TTATTGGCAC GGTGACTGAT
TATGATGAGG ATAATCATGA TACGTTACAG TATTATACTT TGGAAGTAGC TAAGTTAGGA
ACCGATGATT TTCAAGAGGT CTTTAAAGGA ACGAAGTCAG TTAATAATGG GGTCTTAGGA
ATTTTTGACC CGTCGTTATT AGAAAATGAT GCTTATACTT TACGATTAAA AGCGGTTGAT
AGAGGAGGTA ATCTTGTTTT TGAAGAAAGA ACGATTAACG TTGAAGGAGA CTTAAAATTA
GGCAACTTCC AATTATCGTT TACGGATTTA TCGATTCCGG TGGCCGGGAT TCCTATTAGT
ATTACCAGAA CCTATGATAC GTTAACGGCA CAAGAAAGGG ATGATTTTGG GTATGGATGG
CGATTAGAAT TTAGGGATAC TAATTTAAGA ACCAGTTTAG GAAAAGATGA CTATTATGAG
ACGTTTGATA TTATTGGTCA AGGGTTTAAA GAAGGGGATA AAGTCTATCT TACCTTACCA
GGAGGGAAAC GAGAAGCCTT TACGTTTAAG CCTGAATTAG ATAGATTAGG GGCATTTTTA
CAGGGGGCTG CTGCGGGGTT AGGACTAGGA GAAGACCCGG GGTTATATCA TCCTAAATTT
GTTTCTGAGT CCGATTCTAA TAATGTGTTA ACCGTCAAAG ATGTGTTAAT TATTCGGACT
GCTAATGGAG ATTTTGCGGG GTTAGCCGGG AATTTATATA ATCCAGTTGA CCCTTATTTT
GGGGGACAAT ATACGTTAAC GACAGGGGAG GGTATTGTTT ATGAAATTGA GGCAGAAACG
GGAGATTTAT TAACGGTAAC GGATACGAAT AATAATCGAT TAACCTTCTC TGAGAATGGC
ATTAAAAGTG AGACAGGAGT CGAAGTTAAA TTTAATCGAG ATGCTAAGGG AAGAATTACC
TCAATTGTTG ACCCAATGGG GAATGTAATT AAGTATGACT ATGATGGTCA TGGGGATTTA
ATTAAGGTTA TTGATAGGGA AGAGAATGAA ACGAAGTTTG ATTATAGTGA GGAAAGGAAG
CATTATTTAG AGAGAATTAT TGACCCGTTA AATCGGGAAG CGGTGAGGAC TGAATATGAT
GAAACTGGAC GGTTAAAGAA GGTAATTGAT GTTAATGGAG AAGCGGTTGA ATTAGTTTAT
GATGTTGATA ATTCGACGCA GACAACTAAG GGGGAAGAAG GTTATACAAC GACTTATACT
TATGATGAAA AAGGGAATAA GTTAACGGAA ACGGATGCAC TAGGGAATAC CACTTATTAT
ACCTATGGTA AATTGAATCG TTTATTAAGT GAAACCGATG CTAAGGGAAA TACAACCACC
TATGACTATG GAGTCCGTAC AGGTAATTTA TTGTCCACAA AAGATGCACT AGGAAATATT
ACCAAATTCA GTTATGACAG TCGAGGAAAT CTGGTTAGTC TAACCGATGC AGCCAACAAC
ATTACCAAAT TTGAATACGA TTTACAAGGA AACGTTACGA AAATTATTGA TGCCAATGGA
CATGAAACCC ATTACACTTA TGATAGCAAT GGAAACCAAT TAACTGAAAG TAAAACTGTT
ACTACTGCAC AAGGACTGGT AACAGTTTTG ACGCAGAATA CTTATGATAA ACAAGGCAAT
CTTTTATCGG TAACAGATGC AGAAAATAAC CCCACTTATT ATGAATATAA TGAGTTAAAT
CAACAAACAG CAGTCACAGA TACACTCTTA AGAAAAACCG AATACCGTTA TGATAACAAA
GGACAATTAG TAGAAACCAT TTATCCTGAT AGCACTCCTA ATAATAACGC TGATAATCCC
AGAACGATTA CGGTTTATGA CAGAGGAAGT CGTCAAAAAG CGACCATAGA CCAAGCAGGA
AGAGTCACTT ATTATAATTA TGATCAATTA GGCAGATTAA TTGAAACCAT TTATCCTGAT
GAAGTTGATA CTTTAAGTCA ATTTGTTAGT TTTCTCGATA GTAGTAAGAC TGTTACTACG
ATTGATTGGA CAGAGGTAAT TTATCCTGAT AGTAATCCCA GTTATTTAAG TGATAATCCT
CGGACTCAGA CTGAATATTA TCAAGATGGA CAAGTTAAAG CGAATATTAA TGAAAGGGGT
TATAGAACTG AGTATATTTA TGATGCAAAT GACCAATTAA TTGAGATTAT TTATCCTGAA
TTAGAATATA ACCCAGGAAT TAACTTTACG ACAACTTCTA CCTATGATGT AGTAGGAAGA
AAAATTGCTG AAACTGATGG GTTAGGACGA ACAACTAACT ATGTTTATGA TGAATTAGGA
AGACTCACCA AAACCCTATT TGCTGATGGA ACCTTTACCA CTTCTACCTA TGATAAATTA
GGACGAAGAA TTACCACCAC TGACCAAGAA GGAAAGGTAA CTAATTATGA ATATGATTCA
TTAGGACGCT TAACAGATGT GGTTCAATAC CTCAATCAAA ATAGTCTTAA TCCTACAGAA
ATTAGAACCG AATATGGTTA TGATGAACTA GGTCGTTTAA TCTGGGTTGA AGATGCTAAT
GACCACAAAA CTAACTATGA ATATGATAAA TTAGGTCGTC GAACGGACAT AGAATTACCA
TTAGGACAAC GTTCGACAAC GAGTTATGAT GAAGTCGGAA ATATTGAGAC GGTAACAGAT
TTTAATGAGA AGATAATTAC CTATTTCTAT GATGAACAAA ACCGTCTAAT TAAGAAACTG
TTTGCTGATA ATAGTTCCGT TGATTATACT TATACATTAA CAGGATTACG AGAAACGATT
ACAGATAGTC GAGGAACTAC GACTTATACT TATGATGAAC GAGATAGATT AATTGCTCAA
ACTGACCCTA CTGGAGTGTA TTTAAACAGT GGAAATACTC TTGAATATAG CTATGATTTA
ACAGGAAATA GAACCTCTGT TACTACCCCA TCGGGAACCG TTTATTATAC CTTCGATGAA
TGGAATCGTT TAAAGACGGT AACAGACGCA GATAATCATC AGACCATTTA TGTCTATGAT
GGGGTCAGTA ATTTAATTGA AACTACTTTC TCTAATGGAG TTATAGAAAC AAGAGATTAT
GATGACTTAA ATCGATTAAT CAAGTTAGAG AATAAGTTAG GTAATCAAGT TATTTCTGGT
TATGAATATA CGTTAGATAA AGTGGGTAAT CGTCTTAAAG TCAAAGAAGC AGATGGAAGG
ATTGTTGAGT ATGAGTATGA TGATTTGTAT CGGTTAATTG AAGAAAAAAT TACGGATTCA
TTGGATACGG TTAATGATGG AAGAGTGATT AGTTATACCT ATGATGCGGT GGGGAATCGG
TTAACTAAGG TTGATTCGGT TGAAGGGACA ACTACTTATG ATTATAATGC TAATGATTGG
TTATTAACTG AAACTGAAGA GAATGGAGAC GTTAAAGAAT ATGAATATGA TGAGACGACT
TTTTATCAAG TAGATGGGTT AGGGAGTACG AGAATTTTAA CTAATGAAAA GGGAGAATTA
ATTAACACTT ATGATTATGA TGCGTTTGGT AATTTAATTG AATCCACAGG AGATATTGAG
AATAATTATT TATTTGCAGG GGAACAGTTT GATGAGAATT TAGGGGAGTA TTATTTAAGG
CAAAGATATT ACAATCAGGA AGTTGGGAGG TTTACAAGAA GGGATACTTA TGAGGGGAGT
TTAAATAATC CTGTTTCTCT GCATAAGTAT CTTTATGCTA ATGCTAATCC TGTTATTTAT
ATAGATCCAA CAGGATTATA TACATTAACT GAGTTTAGTG CTGGACAAGC TATTGCAGAT
GCTTTAGCCA TAAGTCTAGG AATTTCAGGT TTCATCTCAA ACTCTTACAA CCCTGAACGA
CTTGGCGGTT TTGGCGAGAA TGAAAAACCA AGCACTGTAC TAGATAGACT GCTAATCTGG
AGAAATACAT GGGCCCCTGA GTCTATAGGT GGTTTTGGGG AAAATCTACA ACCTACTTTT
CCTAATCATA CAGGGCATTC AAATCGTGAC ATAAATGACT TAATTAGATA TATTTTTGCA
ATTAGTGATC CTTTCGAGCT ATCTAACGAC ATCGCTTATG GTCATGCTTG GAATGCAGCT
AGAAACTTGG AATGGGCGAA ATTAGGTATA AACAGTCAAC AACAACTAGC AGATCTTATT
TATGACATTG TAATTTTTTA TGAACAAAAG AAAGTAGATG GAGATAAAAT TATTTATCTT
GGTAGTGACG GTACAATTGT CATTGATAAT CCCAGAGATC CTGACGGTGG TACAGCTTTT
AATCCCAATA TACAGCAAGG AAATTCGCAA GCATCTCAAA TTTACTTCGA TGAGCAACCA
GGTCGAGTAG TGGACTAA
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| Protein sequence | MTTTLEVLDF NDVDAPIINF PRLANNTITS PIEIIGTVTD YDEDNHDTLQ YYTLEVAKLG
TDDFQEVFKG TKSVNNGVLG IFDPSLLEND AYTLRLKAVD RGGNLVFEER TINVEGDLKL
GNFQLSFTDL SIPVAGIPIS ITRTYDTLTA QERDDFGYGW RLEFRDTNLR TSLGKDDYYE
TFDIIGQGFK EGDKVYLTLP GGKREAFTFK PELDRLGAFL QGAAAGLGLG EDPGLYHPKF
VSESDSNNVL TVKDVLIIRT ANGDFAGLAG NLYNPVDPYF GGQYTLTTGE GIVYEIEAET
GDLLTVTDTN NNRLTFSENG IKSETGVEVK FNRDAKGRIT SIVDPMGNVI KYDYDGHGDL
IKVIDREENE TKFDYSEERK HYLERIIDPL NREAVRTEYD ETGRLKKVID VNGEAVELVY
DVDNSTQTTK GEEGYTTTYT YDEKGNKLTE TDALGNTTYY TYGKLNRLLS ETDAKGNTTT
YDYGVRTGNL LSTKDALGNI TKFSYDSRGN LVSLTDAANN ITKFEYDLQG NVTKIIDANG
HETHYTYDSN GNQLTESKTV TTAQGLVTVL TQNTYDKQGN LLSVTDAENN PTYYEYNELN
QQTAVTDTLL RKTEYRYDNK GQLVETIYPD STPNNNADNP RTITVYDRGS RQKATIDQAG
RVTYYNYDQL GRLIETIYPD EVDTLSQFVS FLDSSKTVTT IDWTEVIYPD SNPSYLSDNP
RTQTEYYQDG QVKANINERG YRTEYIYDAN DQLIEIIYPE LEYNPGINFT TTSTYDVVGR
KIAETDGLGR TTNYVYDELG RLTKTLFADG TFTTSTYDKL GRRITTTDQE GKVTNYEYDS
LGRLTDVVQY LNQNSLNPTE IRTEYGYDEL GRLIWVEDAN DHKTNYEYDK LGRRTDIELP
LGQRSTTSYD EVGNIETVTD FNEKIITYFY DEQNRLIKKL FADNSSVDYT YTLTGLRETI
TDSRGTTTYT YDERDRLIAQ TDPTGVYLNS GNTLEYSYDL TGNRTSVTTP SGTVYYTFDE
WNRLKTVTDA DNHQTIYVYD GVSNLIETTF SNGVIETRDY DDLNRLIKLE NKLGNQVISG
YEYTLDKVGN RLKVKEADGR IVEYEYDDLY RLIEEKITDS LDTVNDGRVI SYTYDAVGNR
LTKVDSVEGT TTYDYNANDW LLTETEENGD VKEYEYDETT FYQVDGLGST RILTNEKGEL
INTYDYDAFG NLIESTGDIE NNYLFAGEQF DENLGEYYLR QRYYNQEVGR FTRRDTYEGS
LNNPVSLHKY LYANANPVIY IDPTGLYTLT EFSAGQAIAD ALAISLGISG FISNSYNPER
LGGFGENEKP STVLDRLLIW RNTWAPESIG GFGENLQPTF PNHTGHSNRD INDLIRYIFA
ISDPFELSND IAYGHAWNAA RNLEWAKLGI NSQQQLADLI YDIVIFYEQK KVDGDKIIYL
GSDGTIVIDN PRDPDGGTAF NPNIQQGNSQ ASQIYFDEQP GRVVD
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