Gene PCC8801_4421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_4421 
Symbol 
ID7104866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand+ 
Start bp4649579 
End bp4650145 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content41% 
IMG OID643477400 
ProductRNA polymerase sigma factor 
Protein accessionYP_002374499 
Protein GI218249128 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTAGCCA ACAACCAAGC TGGTACAACA GACAAAGATA TCGTCTTGCG GTGTCAGCGA 
GGAGATGCTG CCTCCTTTAA ACAACTGTAC CGACGTTATC AACAAAGAGT GCGGTCAACC 
CTTTATCAAC TGTGTGGCCG TGAACTTTTA GATGACTTAG AACAGGAAGT TTTTTTACGG 
GTTTGGAAAG CATTACCTCG ACTGCGAAAC CCTGATTATT TTTCAACTTG GCTGTATCGC 
ATTACCTGGA ATGTAGCCAC GGATAAACGG CGAAAATTCG CTCAAAGTCC CTCGTTCACT 
GAGGATGATT CCAGCTTAAA TATGACTCCT TCACCCTCAT CTAATACTCC TGATTTAATG 
CGATTACACT ATCAAGATTT AGTGCAACAA GGCTTACAAT TACTAAGTCT AGAACATCGC 
GTTGTTTTAG TCTTACATGA CCTAGAAGAT GTGCCGCAAA AAGAAGTTGC TAACATCTTA 
AAGTTACCTA TCGGAACAGT AAAATCTCGT CTGTTTTATG CGCGTAATCA AATTAAAAAA 
TTCTTGCAGC AACAAGGAGC ATTATGA
 
Protein sequence
MLANNQAGTT DKDIVLRCQR GDAASFKQLY RRYQQRVRST LYQLCGRELL DDLEQEVFLR 
VWKALPRLRN PDYFSTWLYR ITWNVATDKR RKFAQSPSFT EDDSSLNMTP SPSSNTPDLM 
RLHYQDLVQQ GLQLLSLEHR VVLVLHDLED VPQKEVANIL KLPIGTVKSR LFYARNQIKK 
FLQQQGAL