Gene PCC8801_4378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_4378 
Symbol 
ID7104832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp4599117 
End bp4600574 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content37% 
IMG OID643477357 
ProductATP-dependent DNA helicase, RecQ family 
Protein accessionYP_002374456 
Protein GI218249085 
COG category[L] Replication, recombination and repair 
COG ID[COG0514] Superfamily II DNA helicase 
TIGRFAM ID[TIGR00614] ATP-dependent DNA helicase, RecQ family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCAG AAAAACGCAC TTGGGAACAA GTTTACCAAG CATTTCAACG GATTTGGGGT 
TACAAAGATT TTAGACCCCC TCAAGGCGAA ATTATACGCT GTTTATTAGC TTCTCAAGAT
ACCTTAATTG TGATGCCAAC GGGTGGAGGA AAATCTATTT GTTTTCAACT TCCCGCTTTA
TTGCAAAAGG GGTTAACTTT AGTGATTTCT CCTTTAGTTG CTTTAATGGA AAATCAGGTT
AAGGAACTAC AAGAACGCAA CCTCCCCACA GCGTTACTCC ATAATGAAAT TCCTAGAAAT
CAACGCAAAG ATACCTTAAA ATTAATTGCT ACTCAACAAT TAAGATTACT TTATTTATCC
CCAGAAACCT TATTGAGTCT TCCTGTTTGG GAAATATTAA TTAATCCCAA CCTAATCATT
AATGGAATTA TTTTAGATGA GGCACATTGT TTAGTGCAAT GGGGAGAAAC TTTTCGTCCT
GCTTATCGTC GGTTAGGGAC AATTAGAAGC GCATTATTAA AGCATAAACC CCCAGAAACG
AAAATAGCGA TCGCTGCTTT TACTGCTACG GCAAATCCTA ACGATCAAGG GATTATTAGT
TCAGTTTTAC ACTTAGAAAA TCCTCAAGTC TTTTGTTTAA ATCCCTATCG TTCTAACTTT
AATCTTCAAG TCAAAATTGC TTGGAGTCCT CGCTGTCGTC GTCATTTATT ATTAAACTTT
ATTCAATCTA AAAAACAGCA ATCTGGCTTA ATTTATGTCC GTTCCCGTCG GGACAGTGAA
GCCTTAGCTC AATGGCTCAA TTCTTTACAA AATAACACGG CTTCTTACCA TGCAGGATTA
AGTCCTCAAC AACGGCGAGA AATTGAAGAA AAATGGTTAA AAAATGAGTT ACAATTCGTT
GTTTGTACCT CTGCTTTTGG GATGGGAATT AATAAAGCCG ATGTCCGTTG GGTAATTCAT
TTTCAACCCC CATCCTTACT ATCAGAATAT CTACAAGAAA TAGGACGGGG AGGACGGGAT
GGAAAGCCGA CAGATGTCTT GATGTTAATG AGTGAACCCA CAGGATGGCT TGATCCAACG
GATAAGCAAA GACAACAGTA TTTTATGCAA AAATTAGAGC AACAAAATCA AGAGGCAAAA
CGGTTAATTA ACCAGATTCC TAAACAGGGA AATATACGAG CGATCGCACA GGAATTTCCG
CAAGGAGAAA TCATCCTTTC ATTGTTACAT AGTCAGGGAC AATTAGAGTG GTTAGATCCG
TTTAATTATC GAATTAAATC AACACAAGTT AATACTAATT CATCTAACTC AAAGAGTAAT
CAACTTATTT ATTATTCTCA AATAAAGCAA TATTTAATAA CCCGTGATTG TCGCTGGCAA
TTCTTACTCA AGAGTTTTGG TTTTCATCAA GATGCTAAAA ACTTTAGATG CGGACATTGT
GATAATTGCC GACGTTAA
 
Protein sequence
MNPEKRTWEQ VYQAFQRIWG YKDFRPPQGE IIRCLLASQD TLIVMPTGGG KSICFQLPAL 
LQKGLTLVIS PLVALMENQV KELQERNLPT ALLHNEIPRN QRKDTLKLIA TQQLRLLYLS
PETLLSLPVW EILINPNLII NGIILDEAHC LVQWGETFRP AYRRLGTIRS ALLKHKPPET
KIAIAAFTAT ANPNDQGIIS SVLHLENPQV FCLNPYRSNF NLQVKIAWSP RCRRHLLLNF
IQSKKQQSGL IYVRSRRDSE ALAQWLNSLQ NNTASYHAGL SPQQRREIEE KWLKNELQFV
VCTSAFGMGI NKADVRWVIH FQPPSLLSEY LQEIGRGGRD GKPTDVLMLM SEPTGWLDPT
DKQRQQYFMQ KLEQQNQEAK RLINQIPKQG NIRAIAQEFP QGEIILSLLH SQGQLEWLDP
FNYRIKSTQV NTNSSNSKSN QLIYYSQIKQ YLITRDCRWQ FLLKSFGFHQ DAKNFRCGHC
DNCRR