Gene PCC8801_4356 details

Gene Information

• Locus tag: PCC8801_4356
• Symbol: rpsD
• ID: 7102706
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: -
• Start bp: 4575941
• End bp: 4576549
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 643477335
• Product: 30S ribosomal protein S4
• Protein accession: YP_002374434
• Protein GI: 218249063
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGTT ATAGAGGACC ACGTCTGAGA GTTGTTCGAC GACTGGGGGA ACTCCCTGGA 
TTAAGTCGGA AAAACCCCCG TCGCGCTTAT CCCCCTGGAC AACATGGACA AGCGCGTAAA 
AAGCGTTCAG AATACGCTAT CCGACTCGAA GAAAAGCAAA AACTTCGCTT TAACTATGGG 
GTAACAGAAG GGCAGTTAAT TCGATACGTC AAGAAGGCAC GGAGAGCCAC GGGTTCTACG 
GGTCAGAAAC TCCTAGAATT GCTAGAAATG CGCCTGGATA ATACGGTTTT TCGCCTAGGA 
ATGGCTGGAA CTATTCCCGC AGCGCGTCAA TTAGTGAATC ACGGTCATAT CACTGTTAAT 
GGTAAAGTAG TGGATATTCC CAGTTATCAG TGCCGTCCTG GGGAAGTGAT CGCAGTTCGC 
AATCAAGAGC GTTCTCGTCG TTTGGTAGAA GCGAATATGC AATATCCAGG GTTAGCTAAC 
CTACCGAGTC ATTTGGAGTT TGACAAAAAT ACCCTAACCG GTAAAGTTAA CGCGGTGATT 
GAACGGGAAT GGATTGCTTT GCAAATTAAT GAATTGTTGG TCGTTGAATA TTATTCTCGG 
AAAGCGTAG 

 

Protein sequence

MSRYRGPRLR VVRRLGELPG LSRKNPRRAY PPGQHGQARK KRSEYAIRLE EKQKLRFNYG 
VTEGQLIRYV KKARRATGST GQKLLELLEM RLDNTVFRLG MAGTIPAARQ LVNHGHITVN 
GKVVDIPSYQ CRPGEVIAVR NQERSRRLVE ANMQYPGLAN LPSHLEFDKN TLTGKVNAVI 
EREWIALQIN ELLVVEYYSR KA