| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_4350 |
|---|
| Symbol | |
|---|
| ID | 7105699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | - |
|---|
| Start bp | 4565464 |
|---|
| End bp | 4567644 |
|---|
| Gene Length | 2181 bp |
|---|
| Protein Length | 726 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643477329 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
|---|
| Protein accession | YP_002374428 |
|---|
| Protein GI | 218249057 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAG CAACTTGTAA CGCACCATTG TCCAGTACTG AGGTAACTCA ATCATTGCAT
CTGTTGCTGC TTGAAGATGT CCCCGAAGAT GTCGAGTTAA TTGTTCTGTC ACTATCGAAC
GCTGATATTG AATTTACCTA TGAGATTGCC CAAACGGCGA CCCTCTATCA AGAAAAACTA
CAACAACAAA CCTACTCAGC GATTTTAGCG GACTATCGTC TGCCAGGATT TAATGGGTTA
CAAGCCTTAA AAATGTTACA AGAGGCTGGC CAAAAAATTC CCTTTATCTT AGTAACTGGG
AGTTTAGGAG AAGAAGCGGC CGTTGAATGT ATGAAAGCGG GAGTAACAGA TTATATTGTT
AAAGATCGGC TATTTCAGTT ACCGACTATA CTAATGAGAT CGCTCGAAGA ATTTGCTCTG
CGTCGAGAAC AACAACGGGT CATGGAAGAA CGCAGACAAG CCGAAATTGC CCTCAGAGCC
AGCGAAAAAC GGTTTCGGGC ACTGATTGAA AATGCCAGCG ATATTATCCT AATTGTCGCC
CCAGACAGTC AATTGACCTA TGCTAGTCCC TCAGTTGAGC GCGTTTTAGG GTACGATGCC
TCTAGCCTTA CAGGTCAACG CTTTTTTGAT TTGATTCACC CGGATGAACA AGGGGAAATT
ATTGGCTTTT TTGACAAAAT TAAAGAAACC TCGAACCTAT CTCAGTTGCT GCCAGATTTT
CGAGTGCGGA CACAAAAAGA CACTTGGGTG ATCTTAGAAG CGATCGCCAG AAATCTGCAA
GACGACCCCG CCGTCGGGGG TTTTGTCGTC AACTGTCATG ATATCACCGA ACGCCATCAA
ACCGCCGAAC AACTGCGCTA CGATGCTTCC CATGATAAAT TAACGGGGTT AGCCAATCGT
TCAGCCCTGC TAAAACAGTT AAAACGAGCT ATTGAGCAAA AAAAACGCCG CAAAGAAGAT
CATTTTGCTC TGTTGTTTCT CGATTTAGAT CGCTTTAAAG TAATCAATGA TGGACTCGGC
CATTTAATGG GAGATCAACT CCTTAAAGAA ATGGCTAAAC GCTTACAACG CTGTCATCGA
GAGGGGGATC TTTTAGCCCG GTTTGGTGGC GATGAATTTG TGTTTTTTCT GAAAGAAATT
CGACAACAAG AACAGGCCAT TGTTGTCGCT GAACGCATTC ATCAAGCTCT GAGAGAACCG
TTTATTCTAA ACCATCAAGA AGTGTTTATT TCCGCTAGTA TTGGTATTAC CCTCAGTGCT
GATCATTATG ATTCCCCCGA ACAAATGTTA CGAGATGCGG ATACGGCAAT GTATTGGGCA
AAAGCGAGGG GACAAGGCGG TCATACTATT TTTGCCCCGA CCATGCACCT ATCTGCCCTG
AAACAATTAC ACTTAGAAAG TGATCTGCGG CAAGCTATAC AACGTCAAGA ATTAGTCGTT
TATTACCAGC CAATTTTCTC CCTTGATACC CAAAAAATTG TCGGAGCCGA AGCCTTAGTC
CGTTGGCAAC CCCCAGAAAA ACCCCTTATT CCTCCTAATG ATTTTATTCC TTTAGCAGAG
GAAACAGGAC TAATTCTTGA GATTGATCAT TGGGTTCTCA AATCCGCTTG TCAACAACTC
TATCAATGGC AACAAGAATT TAAAACCTTA GCTCCTCAAT TTATCAGTGT TAATCTCTCG
CCTAAACAGT TTTCTCAGCC TAATTTAACC GAAAAAATTG TCCAGACAAT CAAAGAAACA
GGACTGGCAG AACAGTGTTT AAAAATAGAA ATTACTGAGA CTGTTTTTCT GGAAAATTCA
ACTAGCGTAT TAGAAATTTT ATGCCAATTA CAGCAGCTAA ATATTCAGAT CTGTCTCGAT
GATTTTGGAA CAGGATATTC CTCCTTAAGC TATTTGCATC AATTTCCTTT GAACAGCTTA
AAACTTGATC GAACTTTTGT TAGTCGTTTA GGGAAAACTA ATAAAAATGA TACCATTGTT
CGGATTGTAG CTACCTTGGC GAATGAATTG GATCTAGAAT TAATTGCTGA AGGAATTGAA
GAGATTGAAC AAATACAATT ATTGCACTAC TTAGGGTATC AATGGGGACA AGGTTATTGT
TTTTCGCCAC CTGTTGATAG TAACTCTTTC ATCGAATTTT TAATAGAAAA TCCCATGAAA
TATAGGATTC AAGAGTCGTA G
|
|---|
| Protein sequence | MSEATCNAPL SSTEVTQSLH LLLLEDVPED VELIVLSLSN ADIEFTYEIA QTATLYQEKL
QQQTYSAILA DYRLPGFNGL QALKMLQEAG QKIPFILVTG SLGEEAAVEC MKAGVTDYIV
KDRLFQLPTI LMRSLEEFAL RREQQRVMEE RRQAEIALRA SEKRFRALIE NASDIILIVA
PDSQLTYASP SVERVLGYDA SSLTGQRFFD LIHPDEQGEI IGFFDKIKET SNLSQLLPDF
RVRTQKDTWV ILEAIARNLQ DDPAVGGFVV NCHDITERHQ TAEQLRYDAS HDKLTGLANR
SALLKQLKRA IEQKKRRKED HFALLFLDLD RFKVINDGLG HLMGDQLLKE MAKRLQRCHR
EGDLLARFGG DEFVFFLKEI RQQEQAIVVA ERIHQALREP FILNHQEVFI SASIGITLSA
DHYDSPEQML RDADTAMYWA KARGQGGHTI FAPTMHLSAL KQLHLESDLR QAIQRQELVV
YYQPIFSLDT QKIVGAEALV RWQPPEKPLI PPNDFIPLAE ETGLILEIDH WVLKSACQQL
YQWQQEFKTL APQFISVNLS PKQFSQPNLT EKIVQTIKET GLAEQCLKIE ITETVFLENS
TSVLEILCQL QQLNIQICLD DFGTGYSSLS YLHQFPLNSL KLDRTFVSRL GKTNKNDTIV
RIVATLANEL DLELIAEGIE EIEQIQLLHY LGYQWGQGYC FSPPVDSNSF IEFLIENPMK
YRIQES
|
|---|
| |