Gene PCC8801_4288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_4288 
Symbol 
ID7103830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp4507618 
End bp4510353 
Gene Length2736 bp 
Protein Length911 aa 
Translation table11 
GC content37% 
IMG OID643477268 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_002374367 
Protein GI218248996 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTG AATTAGACGA AGCTACTATT GCCGCCATGA TTCAAGAAGC CCGTCAGTGC 
TTTTTAGAAG AAGATGCCCC CGAAGACCTA AAAACCCTTC AAGAAGGCGT AAAACAGGGT
CAAAATTGCA CTGATTTCAA ATCCCTCTTA CGGGCAGCCC ATTCCTTAAA AGGGGGCGCA
GGTATCGCTC AACTGTCTAG TTTAGGAGAA TTAGCCCATC AACTCGAAGA TGTTCTTGAA
GCACTTTACC AAGGAGAAAC GACTCATCCT AATGAAGCCT GGATGCTGAT GGAATGGGGA
GTCCATGAAA TCGCTATGAT GTTAAATCAG GCGCAAACAG TGGAAACGGT GAGTGCTGAC
CCTAATTTAG TTCAGGCTTT AACTGAGTTT ACTACCACTA AACCCCTTGT CGGAGTCTCT
GAAACAATCT TGAGTTCAGA TAATAGTAAT TCTTTGATTC AAACGCTTTT AGAGAATGAT
TTAGAGACTT GCTGCACTCG AATTGAGCAA TTATCGCAAG AGACTTCCAG CGAACAAATA
CAAGAAGCAA TTACGACTTT TTATAATGAG TGTTTATTAT TAGGAGAAAC CCTAGATTTA
CCTTGGCTTA TTGAAATTAT TGACCCCTTA GAAGCTATTT TAAAACAAGT CGAACCTCTG
GAGGCGTTAC AAATAACCCA ACAGTTAATT ATTGAATTAC GGCAGCAACG TAAGGCTTAT
TTAACAGGGG AGTATTCTAG TGGGGGTTCC TCTATTTCAT CGGTATCAGT GACTACTTTT
GATGACGAAG AATGGTCTAA TGATGGGTTA GAAGATGATT GGAACAATGA ATTAGATTTT
CTTGGAGATT TAACAGATAA TCAAACTCCT ATAAATAATC AGGATTTTTG TTCTCAACCC
ATAGAGGAAG AATTAACCCC ACTTTCTCAG TTACGCATTC CTTTAGAACG GTTAGAAGGA
ATGACCAATA ATATTGAAGA ATTATTAGTC GCTAAAGAAA GACTTTGTTT GCAACAGCAA
CAGTTAAGTC AAGTGACACG ACAATTACGA CAAATTACCC GTCAGTTTGC TCCTATTACT
CAACATATTC AAACCTTTTA TGATCAATTA GCGATCGCAC CTTTATCTGT TACTACTTCG
AGAAATGAAG ACTTTGATGC GTTGGAATTA GATGGTTTTA CTGAAGTTCA TAGTAGTTTA
CAAACCTTTC AGGAATTGAT CTTAAAAATT CAAGAAAACT ATGCCGATCT TAATTTAATT
AATCAAGACT TTGCTGACAA TGTAGAAGTC GTTCATACCA ATTTAGATAA CTTATACACT
AATATTACTG AATCTCGCCT CGTTCCTTTT GCAATGATGG CTCAGCGATT TATTCCTCAG
ATTCAATATC TCAATCGTCG TTTTGGCAAA TCAGTAGAAT TATCCTTACA AGGAGAAGAA
ATCTTAATTG ATCAAATCAT TTTAGAACAA CTGCAAACCC CTTTAACCCA TTTAATTAAT
AATGCTTTTG ATCATGGTAT TGAAGAACCA CAAGAACGAT TGATAAAACA AAAATCAAAA
ATGGCTAAAA TTCGTTTAGA AGCTAAAGTT GACAATAATC AATTGGTCAT TATTTTAAGT
GATGATGGTC AAGGCATTGA TTTATACAAA GTTTATCAAA AAGCTAAAAT CAAAGGCATT
GCTGAAGCAA ATACTCCCTT TGAAGAATTG TCAAAAACTA ATATTTTAAA TTTGATTTTT
AGGCCAAATT TTTCTACCGC TAAAACAATT AATGAACTGT CTGGCAGGGG AATGGGCTTG
GATATTGTTC GTAGCAAAAT TCAAAAATTA CGAGGAACGA TTGTCGTTGA AACTGAAGAG
AATCAAGGAA CAACATTTAT CATGAAAATT CCCTTGAATT TAAGCTTGAT GCCTCTCTTT
TTATTGCAAT GGCAAAATAA TCTATTAGCC ATTCCTACCG CTAGCGTTTT AGATAGTATT
CCCATTAATG AAATTGTCTG GATAGATCAA AATTCAAGTT TAGTAAACTG GCGAGGAAAT
CCGATTTCAG TCATTTCTCT CTCAGAAGTA TTGTGTTATC CGCAAAGTTC AAAAGAGTCA
ATTGCTCCGC AAATAGCTAT GGTTTTAGAT AACTTTTGCA CTCCCTTTAT GGTCATGGTA
GATAGTTTAC TCAGTGAACA AAAACTCATT GTTAAACCCT TTGATGACAC CGTAACCACC
CCTAACTATT TAGCTGGTTG TACCATTTTA GGAGGAGGAG AAATTGCTCC GGTTATTCTT
CCCCATTCCT TGAACATTAC ACTACCCCGC AACAAAACCG AGCAACCAAC CATTACTTAT
CCCGTTTCAA ACGCCAACCA ACCAACAATT TTAGTAGCCG AAGATTCTGT CGCTACTCGA
CGTTTACTCG AACGACTGTT AACAAAAGTC GGGTTTTCTG TGATTGTTTG TCGTGATGGA
CAAGATGCTT TAGATCAACT CTCTCAATAC AATAGAAATA TTAATCTCAT TATTTCTGAT
GTTGAAATGC CGCGTCTCAA TGGGTTTGAA CTACTCAAAA CCATCCGTTC TGACAAGAAC
TGGCAAAAAA TTCCTGTGGT AATGGCTACC TCCCGCACGG GACAACACCA TCAACAACAA
GCGATGCAAT TAGGAGCGAA TGCCTATTTA GGTAAGCCAA TTTTACCCAA TATTTTATTA
GAAACCATTG ACCCTCTACT CAACCCTGTT AGTTAA
 
Protein sequence
MSFELDEATI AAMIQEARQC FLEEDAPEDL KTLQEGVKQG QNCTDFKSLL RAAHSLKGGA 
GIAQLSSLGE LAHQLEDVLE ALYQGETTHP NEAWMLMEWG VHEIAMMLNQ AQTVETVSAD
PNLVQALTEF TTTKPLVGVS ETILSSDNSN SLIQTLLEND LETCCTRIEQ LSQETSSEQI
QEAITTFYNE CLLLGETLDL PWLIEIIDPL EAILKQVEPL EALQITQQLI IELRQQRKAY
LTGEYSSGGS SISSVSVTTF DDEEWSNDGL EDDWNNELDF LGDLTDNQTP INNQDFCSQP
IEEELTPLSQ LRIPLERLEG MTNNIEELLV AKERLCLQQQ QLSQVTRQLR QITRQFAPIT
QHIQTFYDQL AIAPLSVTTS RNEDFDALEL DGFTEVHSSL QTFQELILKI QENYADLNLI
NQDFADNVEV VHTNLDNLYT NITESRLVPF AMMAQRFIPQ IQYLNRRFGK SVELSLQGEE
ILIDQIILEQ LQTPLTHLIN NAFDHGIEEP QERLIKQKSK MAKIRLEAKV DNNQLVIILS
DDGQGIDLYK VYQKAKIKGI AEANTPFEEL SKTNILNLIF RPNFSTAKTI NELSGRGMGL
DIVRSKIQKL RGTIVVETEE NQGTTFIMKI PLNLSLMPLF LLQWQNNLLA IPTASVLDSI
PINEIVWIDQ NSSLVNWRGN PISVISLSEV LCYPQSSKES IAPQIAMVLD NFCTPFMVMV
DSLLSEQKLI VKPFDDTVTT PNYLAGCTIL GGGEIAPVIL PHSLNITLPR NKTEQPTITY
PVSNANQPTI LVAEDSVATR RLLERLLTKV GFSVIVCRDG QDALDQLSQY NRNINLIISD
VEMPRLNGFE LLKTIRSDKN WQKIPVVMAT SRTGQHHQQQ AMQLGANAYL GKPILPNILL
ETIDPLLNPV S