Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_4190 |
Symbol | |
ID | 7104587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | - |
Start bp | 4394929 |
End bp | 4395756 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643477177 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_002374276 |
Protein GI | 218248905 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGCAG TACCAGTACA AGTCAACGTG GTGATTGAAA CCCTGAAAAC CCAAGTCACG GGATTTGGTC TAAAACTCAT TGGCGCAATT TTATTGTGGG TGATTGGTCA ATGGTTAATT ACCAAAGGGG TCAATTTACT CGCAAAAGTT CTTAAAAAAC AAAACATTGA ACCGACACTC ATTGCCTATG TTAACAATTT CCTAGGCATT GGCTTAAAAA TTGTCTTAAT TGTTGCTATT CTCGGTTATT TTGGCATTGA AACCACTTCC TTTGCTGCTT TGTTAGCAGC AGCCGGGGTT GCCATTGGGG CAGCTTGGGG CGGATTATTA GCCAATTTCG CAGCCGGAAT CTTTTTAGTT ATCTTTCGTC CCTTTAGTGT CGGTGACTTT GTTTGCGCGG GTGGAGTAAC CGGAACGGTT GAAGAAATTG GTCTATTTGT GACGAGCATC AATACCATAG ATAATGTCAG AAATATTATC GGAAATAACA AAATTTTTGC TGATAACATT CAAAACTTTA CGGCTAATCC CTATCGTCGT GTTGATTTAG TTGCCCAACT CAATCACAGT GTTAACTATG GGGAAGCCAT TAACCGACTC AAAGCAACCG TTAGTCAAAT TCCTAACGTT ATTGATCATC CTTCCCCTGA AATTGAGATC TTAGAATTTA ATCTGGCAGG TCCGGTTTTA GCGGTTCGTC CCTATTGCCA TAATGATCAT TATTGGCAAG TTTATTTTGA TACGAATAAA GCCATTCGAG AAACATTAGG AGATGCTTAT CCTGTGCCTG AACAACATTA CGTCATTCGT CAAACTTCAG CTATTTAA
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Protein sequence | MDAVPVQVNV VIETLKTQVT GFGLKLIGAI LLWVIGQWLI TKGVNLLAKV LKKQNIEPTL IAYVNNFLGI GLKIVLIVAI LGYFGIETTS FAALLAAAGV AIGAAWGGLL ANFAAGIFLV IFRPFSVGDF VCAGGVTGTV EEIGLFVTSI NTIDNVRNII GNNKIFADNI QNFTANPYRR VDLVAQLNHS VNYGEAINRL KATVSQIPNV IDHPSPEIEI LEFNLAGPVL AVRPYCHNDH YWQVYFDTNK AIRETLGDAY PVPEQHYVIR QTSAI
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