| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_4164 |
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| Symbol | trmE |
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| ID | 7104567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8801 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011726 |
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| Strand | - |
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| Start bp | 4365094 |
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| End bp | 4366476 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643477151 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002374250 |
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| Protein GI | 218248879 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAC TTGTTACCCT AGGAGAGACG ATCGCAGCGA TCGCTACTGC TATTGTTCCC
CAACAAGGGA GTATCGGCAT TGTTCGTCTC TCAGGAAACC AGGCCGTAAC CATCGCCCGT
CAGCTTTTTA CTGCCCCTGG ACAGCAAAAA TGGGAAAGTC ATCGCATTCT CTATGGTTAC
ATCCGTCATC CCCAAACTCA ACAGGTGATC GATGAGGCGT TACTGTTGTT AATGTTAGCT
CCTCGTTCCT ATACCCGTGA AGATGTGGTG GAATTTCACT GTCATGGGGG CATTATTCCT
GTTCAACAGG TTTTACAATT GTGTGTGGAA CAGGGAGCAA AATTAGCCCA ACCAGGAGAA
TTTACCCTAC GGGCGTTCCT CAACGGCAGA ATTGACCTAA CTCAAGCCGA AAGCGTCGCC
CAATTGGTGG GGGCTCGATC GCCCCAAGCG TCTCAAATGG CACTGGCCGG GTTACAAGGG
AAACTCGCCC AACCTATCCG CCAGTTACGC GATCGCTGTC TTGACATCCT CGCAGAAGTT
GAGGCAAGAA TCGACTTTGA GGAGGATTTA CCCCCCCTGG ACGAAAATTC TATTATTGAG
GGGTTACAGG ACATTTTAAC CCACGTTCAA GCCCTGTTAG CCACGGCAGA CCGAGGGGAA
CTCCTACGGA CAGGGTTGAA GGTGGCCATT GTAGGTCGTC CAAATGTGGG CAAATCGAGT
CTATTAAATG CTTGGAGTCG TAGCGATCGC GCTATTGTGA CGGATTTACC GGGAACGACT
CGCGATGTGG TAGAATCTCA GCTAATTGTA GGGGGTATTC CTATTCAGGT ACTTGATACC
GCAGGAATCC GCGAAACTGC CGATAGGGTA GAAAAACTTG GGGTTGAGAG ATCGCGTCAT
GTTGCTAGTC AAGCGGATCT CGTTTTACTC ACCATTGATG CTCAAATGGG ATGGACAACA
GAGGATGAAG CCATTTATCA ACAAGTTCAA CATCGTCCCC TAATTTTAGT GATTAATAAA
ATTGATTTAG GGTTAGCTGA CTCTCTTAGT TTTATACCAC AAATCAAGCA AATTGTCAAG
ACTGTGGCTG CTCAAAATCA AGGAATTGAA CAGTTAGAAA AGGCAATTTT AGCATCAGTT
GAAAGCCAAA ATATTCAAGC AGCTAACTTA GATTTAGCCA TTAATCAACG ACAAGCAGCC
GTCTTAACCC GCGCTAAAAT TGCTCTAGAA AAGGTACAAG AAACGATTGT TAATCAACTT
CCCCTCGACT TTTGGACGAT TGATCTACGC GCTGCTATTC AAGCATTAGG AGAAATTACG
GGAGAGGAAA TTACTGAATC GGTATTAGAT AGAATTTTTA GTCGCTTTTG TATTGGGAAA
TGA
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| Protein sequence | MAELVTLGET IAAIATAIVP QQGSIGIVRL SGNQAVTIAR QLFTAPGQQK WESHRILYGY
IRHPQTQQVI DEALLLLMLA PRSYTREDVV EFHCHGGIIP VQQVLQLCVE QGAKLAQPGE
FTLRAFLNGR IDLTQAESVA QLVGARSPQA SQMALAGLQG KLAQPIRQLR DRCLDILAEV
EARIDFEEDL PPLDENSIIE GLQDILTHVQ ALLATADRGE LLRTGLKVAI VGRPNVGKSS
LLNAWSRSDR AIVTDLPGTT RDVVESQLIV GGIPIQVLDT AGIRETADRV EKLGVERSRH
VASQADLVLL TIDAQMGWTT EDEAIYQQVQ HRPLILVINK IDLGLADSLS FIPQIKQIVK
TVAAQNQGIE QLEKAILASV ESQNIQAANL DLAINQRQAA VLTRAKIALE KVQETIVNQL
PLDFWTIDLR AAIQALGEIT GEEITESVLD RIFSRFCIGK
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