Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_4132 |
Symbol | |
ID | 7101915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | - |
Start bp | 4336454 |
End bp | 4337707 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643477121 |
Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
Protein accession | YP_002374220 |
Protein GI | 218248849 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGCCA CACCATTTTA TTCTGACACC GATTATTATT CTCCCTTGGC ATCTGACGGA AATGCTTCTT CCGTCGGGTT TTCTGAGAAG GCTTATGAAT TACGGGAGGG TTCCTTAGAA CTGGAACTAC ATGGAATAGA CTTTACAGAA GCCGAAAAAA ATCACCACCA AGGTAGTACA GATTTAGTGA GATTATACCT TCAAGATATT GGTCGAGTTC CTCTACTCAA CCAAGAAGAA GAAGTGATCA AAGCGCAACA AGTCCAAAGC TACGTCGAGT TATTAGATTT GCGTCAAAAG GCGGCTCAAG CAGGGGATAG AGCCATTCAA CAATTGATTG AAATGGCAGA AATTCACGAT CGCTTGTTCA TTAGTCTCGG CTATCGTCCA TCTTGGGACC GGTGGGCAAA GGCTGCACAA ATCTCCGTTG GGGAATTGAA AACGATTCTA GGACAAGGAA AAGAACGCTG GGCTCAACTG GCCGACATTG AGCTAGATCA ACTCGAAACG ATTGAAAAAG TCGGGATTCG CGCGAAAGAA CAGATGATCA AAGCCAATTT GCGTCTAGTG GTGTCTGTGG CCAAAAAATA TCAACATCGT GGGTTAGAAC TCCTCGACTT GATTCAAGAA GGAACCCTAG GGTTAGAACG AGCAGTCGAA AAGTTTGATC CCACTAAAGG ATATCGCTTT TCTACCTACG CTTATTGGTG GATTCGGCAG GGCATTACTA GAGCAATCTC CACCCAAAGC CGTATTATTC GACTTCCGGT GCACATCACC GAAAAACTCA ATAAAATTAA ACGAGCCCAG AGAAAGCTTT CCCAAGAAAA AGGGCGCAAA GCGACTATCG AAGAAATGTC CAAGGAATTG GATATGAGTG CCGAGCAAAT TAGGGAAGTG TTGCTGCGCA TTCCTCGCTC AGTCTCCTTA GAGGTGAAAG TCGGTAAAGA AAAAGATACG GAATTAGTAG ACCTATTAGA AACCGAATGT CAATCCCCTG AAGAAAGTTT AATCAGTGAA TCCCTACGGA AAGATTTGCA AGTCCTTCTT GAAGATCTCA CGGAACGAGA ACAGGACGTA ATTAAGCTGC GCTACGGGTT CGAGGATGGA ACTTGTTACT CCTTAGCCGA TATTGGGCGT GTCCTAGAAT TGTCCCGTGA GCGCGTGCGT CAAATTGAAG CTAAGGCACT ACAAAAGTTA CGCCAACCGC GACGACGCAA TCAAATTCGG GATTATTTTG AATCCCTAAC CTAA
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Protein sequence | MPATPFYSDT DYYSPLASDG NASSVGFSEK AYELREGSLE LELHGIDFTE AEKNHHQGST DLVRLYLQDI GRVPLLNQEE EVIKAQQVQS YVELLDLRQK AAQAGDRAIQ QLIEMAEIHD RLFISLGYRP SWDRWAKAAQ ISVGELKTIL GQGKERWAQL ADIELDQLET IEKVGIRAKE QMIKANLRLV VSVAKKYQHR GLELLDLIQE GTLGLERAVE KFDPTKGYRF STYAYWWIRQ GITRAISTQS RIIRLPVHIT EKLNKIKRAQ RKLSQEKGRK ATIEEMSKEL DMSAEQIREV LLRIPRSVSL EVKVGKEKDT ELVDLLETEC QSPEESLISE SLRKDLQVLL EDLTEREQDV IKLRYGFEDG TCYSLADIGR VLELSRERVR QIEAKALQKL RQPRRRNQIR DYFESLT
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