| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_3999 |
|---|
| Symbol | |
|---|
| ID | 7103485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | - |
|---|
| Start bp | 4185649 |
|---|
| End bp | 4188462 |
|---|
| Gene Length | 2814 bp |
|---|
| Protein Length | 937 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 643476994 |
|---|
| Product | small GTP-binding protein |
|---|
| Protein accession | YP_002374094 |
|---|
| Protein GI | 218248723 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTAATA CAGATACAGA AATTATCAAA TTAATTGAAG AAGCGGCGAG AAACAAAGTA
GAAACTCTCG ATCTAACCTT TAAGCGATTA ACGAGCTTAC CGCCAGAAAT TGGACAACTT
AAAAATCATC TAAAATTTTT AGATCTAAGA AACAATAAGC TTAAAACTCT TCCGCCAGAA
ATCGGAACAT TACAAAGTCT AAATGCGCTA TTTTTAACAA CTAATTACTT AGAAGAATTA
CCACCAGAAA TTGGCAATCT TTCAACCCTA CACCGTCTCA GTCTAACCGA AAATAAATTA
AGTCATTTGC CTCAAGAATT TGGCAATCTT ATCGGATTAA CTGAACTGTA TTTAGCGAAC
AATCAACTAA ACAGTTTACC CACAGAATTT GGTCGTCTAA TTAATTTAGA GAGACTCTCT
TTAAGCAATA ATCAATTAAC TCTATTGCCA GAAGAATTTG GTAACTTAAA AAAGTTAAGC
TGGTTAGATC TTAAATCAAA CAAGCTAGAA AGTTTAAATC CAGAAATAAG AGATCTTAAG
CAACTTTCTA AACTTAATAT TAGTTATAAT CAATTAACTA ACTTACCCCC ACAAATAAGT
GAAGTTGAAA GTCTGATTGA ACTCAATGCT AGTTATAATC AATTAACCAT TTTGCCAGGT
GAACTTGGTG AATTATCTAA CCTTGATTTA TTGAATTTGA GTCATAATAA AATTGAAAAG
TTACCTCGAG AAATTGGACA ACTAAAAAAT CTCAATACAT TAAATTTAAT CTATAATAAC
CTATATTATC TTCCGTCTCA AATTGGAGAG CTTAGCCAAC TTATTGATCT GCGTCTCAGC
CACAATTATT TAGACAATAT TCCCTCTGAA ATTGAAAAAC TTAGAAAACT GACTACCCTA
TATCTTGGCT ATAATAAACT CAAAATATTA CCAACAGGAA TTATTCAATT AGTTCGTTTT
GGGCAGCTAA CAATACTTGA TCTTAAAGAG AATTTACTTT CTATTCCTCC AGAAATTATT
TGGAGTAAAA ATGATCCTAA TAAAATCATA GATTTTTATG AAAAGCAACA ATTAAATCAT
GAAAAACAAC ATTTAAACGA AGCAAAAATT TTGTTAGTGG GACAAGGTGC TGTTGGCAAA
ACCTCTCTAA TTAGGAGATT AATTTATGGA CAATTTGATA TTCAACAACC TAAAACTCAC
GGTATTAACA TCAAATCTTG GTATCTTAAT ATTAACAATA ATCAAGATGT AAAACTGAAC
GTTTGGGATT TTGGCGGACA GGAAATTTAT CATGCAACAC ATCAGTTTTT TCTGACGCAA
AGAAGTTTAT ATTTATTGGT TTTAAATTCT CGTTTAGATG AAAGAGATAA TCAACTGGAA
TACTGGTTGC AAATTATTCA AAGTTATGGT AACTCTTCTC CTATTATTAT TGTCATTAAC
CGCATTGATG AGCATTTTTT AGATTTAGAT CGTCGGGGGT TAAGAAATAA ATATCCTAAC
ATTAAGGCCT TTGTTGAAAC CTCTTGTAAA ACGGGATACG GGATGGATGA ATTGCAAGAA
ACAATTGCCT ATGAAGTGTC TCAACTAAGT CATATTTATG ATGAATTACC TCGAAATTGG
CTCATTATTA AAGCTGAATT AGAAAAGAAA AAAGAGCAAA ATTGGGATTA CATCAGTTAC
GAAGAATATC AAGAAATGTG TAAACAGTAT GATATCATAA CTCAAGAAGA ACAAAAAGCG
TTAATTAGTT TCCTTCATAA TTTAGGAGTT GCTTTAAACT TTCAAGATGA TCCCAGACTC
AAGGATACTA ATATCCTTAA TCCTTTGTGG GTAACAAATG GGGTTTATAA AATTCTCGAT
GATAAAGCCT TAGAAAATCA TTATAAAGGC ATTTTGATAC CAGGAATGCT AGAGAGAATT
TTAGATGATG CTAAATATCC CAGACATAAA CATATGTTCA TCTTAGAAAT GATGCGTAAA
TTTGAACTTT GTTTTCAATT AGAAAAAGCC GGAGAACCAG AATTTTTAAT TGCAGATTTA
TTACCAAAAG AAGAACCAGA AAACCTTAAT CAATGGGAAA AAGGATTAGC TTTTGAATAT
CATTATAGTG TCTTACCGAG TAGTATTCTC TCTCGCTTTA TTGTCCGCAT GAGTCAGTTG
ATTTATAATA ATTTATACTG GCGCAATGGA GTAGTTCTCA AAGATGAAGA TAACCTAGCA
TTAATTAAAG CCGATCGCTA CTCTAATAAA ATCTTTATTT GGGTGAGTGG ACTCGAAGAA
ACTCGCCGAG ATTTACTAAA AGCAATTCGC ATAGACTTCC AACAAATTCA TCAAAATGTT
CCAGGCATTG AAGTCACTGA AAAGATTGTC ATTCCTAACC ATTCTGAAAT TGTCGTAGAC
TATCAATATT TATTAGATTT AGAACAGATG GAAATCACGC ATTTTGTTCC AGTAGGATTA
AAAGCACAAA TCAATGTTAA AGAATTACTA GAAGGCTTTA TTTCTGAACA AGAACGTAGT
CAAAAAAGCG AAGTATTTCC GATAAAATCA CCGATATATG AACCAGTTAA TACTCCCAAA
AAAACTAAAG TAAAAACCTA TAAATTAGTT TTCTTAAATC CTTTGGTCGT TTACAATATC
AGTTTTTTAA TTACCTTTAG TATTCTAATA ATTTTCAGTA AATCTTTACC CATATATTTG
CTAGCTATAA TCATCTTATT AGGGCTAATT CTTATGATAA CAATTGTTAT TTTGAAAGAC
AATCAAAATA ATAAGAAATT AATCCAATCA ACCTTTAAAA AAAAGCAGAA ATAA
|
|---|
| Protein sequence | MVNTDTEIIK LIEEAARNKV ETLDLTFKRL TSLPPEIGQL KNHLKFLDLR NNKLKTLPPE
IGTLQSLNAL FLTTNYLEEL PPEIGNLSTL HRLSLTENKL SHLPQEFGNL IGLTELYLAN
NQLNSLPTEF GRLINLERLS LSNNQLTLLP EEFGNLKKLS WLDLKSNKLE SLNPEIRDLK
QLSKLNISYN QLTNLPPQIS EVESLIELNA SYNQLTILPG ELGELSNLDL LNLSHNKIEK
LPREIGQLKN LNTLNLIYNN LYYLPSQIGE LSQLIDLRLS HNYLDNIPSE IEKLRKLTTL
YLGYNKLKIL PTGIIQLVRF GQLTILDLKE NLLSIPPEII WSKNDPNKII DFYEKQQLNH
EKQHLNEAKI LLVGQGAVGK TSLIRRLIYG QFDIQQPKTH GINIKSWYLN INNNQDVKLN
VWDFGGQEIY HATHQFFLTQ RSLYLLVLNS RLDERDNQLE YWLQIIQSYG NSSPIIIVIN
RIDEHFLDLD RRGLRNKYPN IKAFVETSCK TGYGMDELQE TIAYEVSQLS HIYDELPRNW
LIIKAELEKK KEQNWDYISY EEYQEMCKQY DIITQEEQKA LISFLHNLGV ALNFQDDPRL
KDTNILNPLW VTNGVYKILD DKALENHYKG ILIPGMLERI LDDAKYPRHK HMFILEMMRK
FELCFQLEKA GEPEFLIADL LPKEEPENLN QWEKGLAFEY HYSVLPSSIL SRFIVRMSQL
IYNNLYWRNG VVLKDEDNLA LIKADRYSNK IFIWVSGLEE TRRDLLKAIR IDFQQIHQNV
PGIEVTEKIV IPNHSEIVVD YQYLLDLEQM EITHFVPVGL KAQINVKELL EGFISEQERS
QKSEVFPIKS PIYEPVNTPK KTKVKTYKLV FLNPLVVYNI SFLITFSILI IFSKSLPIYL
LAIIILLGLI LMITIVILKD NQNNKKLIQS TFKKKQK
|
|---|
| |