Gene PCC8801_3989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3989 
Symbol 
ID7103477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp4175632 
End bp4176327 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content40% 
IMG OID643476984 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002374084 
Protein GI218248713 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATGT TTACCTCTGC TATCAATCCT TGTATTTTTC TGGTTGAACT CGATGATTCG 
TTTAATGAAC GGGTGAAAGT TGATTTAGAC GAGGCTGGTT ATATTCCCGT GATTATCCCT
GATGCGGTGC AAGCTTTCGC TGAGGTTAAA CTCAGACAAC CAGCAATGGT GGTGATTGAT
CGTAACCGTT CTCGAAAGGC GGGGTTAACC TTGTGTCGTC AGCTCAGAAA GGCCGATAGT
CACATTTTGA TTATTATGGT TCTAGAAGAA GAAACCGTTG AAGAACGGGT GGTTTGTTTG
GAAGCAGGAG CCGATGATTA TTTATTAAAA CCCTATCATG GACCGACTTT AATTAAACTG
ATTCAATTTT ATTTAGCTCC CCCTCAAATG GTTAAAGAAC AGCTTCAGTT TGATGATTTA
GTTCTTGATT TAAGTACCCG TCGATTGTTT CTCAAGGAAA AGGCAATTGA TTTAACAATG
AAGGAATTTG AATTGCTTAA ATATTTGATG TCTCATCCGA AAGAAGTGCT CACGCGAGAG
AAAATTTTAG AGAATGTTTG GGGTTACGAT TTTCAAGGGG AATCTAATGT CATTGAGGTG
TATATTCGCT ATTTGCGTTT AAAGATAGAA AGTGAGGGAC ACAAGCGGTT AATTCATACG
GTTCGGGGGG TGGGTTATGT ATTACGAGAG GGTTAA
 
Protein sequence
MAMFTSAINP CIFLVELDDS FNERVKVDLD EAGYIPVIIP DAVQAFAEVK LRQPAMVVID 
RNRSRKAGLT LCRQLRKADS HILIIMVLEE ETVEERVVCL EAGADDYLLK PYHGPTLIKL
IQFYLAPPQM VKEQLQFDDL VLDLSTRRLF LKEKAIDLTM KEFELLKYLM SHPKEVLTRE
KILENVWGYD FQGESNVIEV YIRYLRLKIE SEGHKRLIHT VRGVGYVLRE G