Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_3976 |
Symbol | |
ID | 7103468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | - |
Start bp | 4163623 |
End bp | 4165347 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643476971 |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_002374071 |
Protein GI | 218248700 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACTT CACGACTTCG ACAGCTTGGT GAATATCTCC GTCCCTATTG GAAACAAGTA CTCTGGGGAA TGGGTGCACT ATTGTTGGTT AATGGGTTGG GGGTCTATAT TCCTCTACTC ATCCGAGATA GCATTGATGA TCTGCGTCAG GCTTTCAGTT TTGACCAAGT ATTGCGCTAT GTTGTCGTTA TTTTCGTTCT GGCGGCTTTT ATGTGGGCTA TCCGCATGAT CTCCCGTCTC CTCATTTTTG GGGTAGGTCG TCAAGTGGAA GTGACCCTCA AACAACGCAT CTTTGACCAT CTCCTGACCC TAGAACCCTC TTATTTTTCG ATCAACACCT CCGGAGATTT AATTAACCGT GCCACGAGCG ATGTGGATAA TATTCGTCGT CTGGTGGGGT TTGCTGTCTT GAGTTTAATT AATACGATTT TTGCCTATCT TCTCACCCTT CCGGCGATGT TGGCCATTCA TGTTCCTCTG AGTTTAATGG CTGTTTCTGT CTATCCTTTG ATGTTACTAA CGGTGCAAGT TTTTAGCCGC AAATTGCAAG ATCAGCAGCT AGAGGTACAG GAACAATTGT CTTCGGTGAG TGAGTTAATT CAAGAAGATA TGAGCGGGAT AGCGTTAATT AAAATTTATG CCCAAGAAAC CAACGAACGC CGCGCTTTTG ATCACAAAAA CCGTCAACTT CTCAAAGCGA ATTTAAAACT AGCTCAAACC CGTAATTTTC TGTTTCCTTT AATTGAAGGG ATTTCTTTTC TGAGTTTATT GGCACTTTTG TATTTTGGAA CGGAAGCCAT TAATCAAGGA ACTATCAGTA TTGGAGATTT TATCGCTCTA ATTATTTTAG TAGAAAGATT AGTGTTTCCA ACGGCTTTGT TAGGATTTAC CATTACAGCC TATCAACGAG GAGAAGTCAG TATAGATAGA GTTGAGGCTA TTTTTCAAGC CTATCCTAAA ATTAAAGATG CAACAAACAC TATTTCTATT GACCCCCAAA AAATTAAAGG TCAATTAGTC GCGCGTAATC TAAATTATAC CTATCCAGGG TCTACCAAAC CAGCCTTAAA AGAGGTTAAT TTTACAATTA ATCCGGGGGA AACAATTGCC ATTATTGGTT CAATTGGATC AGGAAAATCA ACTTTAGCCA ATACCTTACC TCGTTTGCTC GATATTGCGC CAGGACAGTT ATTTTTAGAT GATTATGACG TTACTGAGTT AAAATTAGCC GATTTACGGG GTGCGATCGC CTATGTGCCC CAAGATAGTT TTCTCTTCAG TACCACCATT GAAAATAATA TCCGCTATGG CGATCCTTTA AAAGAGAGAT TTGAGGTAGA ATATGCGGCT AAACAATCGC AAATTTATGA AGAAATTCTC AACTTTCCTC AACAGTATGA CACCCTAGTA GGAGAAAGAG GAATTACCCT TTCTGGAGGA CAACGACAAC GAACAGCACT AGCCAGAGCG TTGTTAATGG ATGCCCCCGT GTTAATATTA GATGATGCCC TTTCTAGTGT TGATAATAAA ACCGCTACGA ACATTTTAGA AAATCTCTCT AGTCAACGCA AAAAAACGGT TATTTTTATT ACCCATCATC TATCAGCAGC AGCGCAAGCA GACCGCATTT TTGTCATGAA TAAAGGGCAA ATTATTCAAA TGGGAACCCA TCAAACATTA TTGCAACAAC CGGGGTTTTA TCAGTCGCTA TGGAAGCAAG GTTAA
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Protein sequence | MATSRLRQLG EYLRPYWKQV LWGMGALLLV NGLGVYIPLL IRDSIDDLRQ AFSFDQVLRY VVVIFVLAAF MWAIRMISRL LIFGVGRQVE VTLKQRIFDH LLTLEPSYFS INTSGDLINR ATSDVDNIRR LVGFAVLSLI NTIFAYLLTL PAMLAIHVPL SLMAVSVYPL MLLTVQVFSR KLQDQQLEVQ EQLSSVSELI QEDMSGIALI KIYAQETNER RAFDHKNRQL LKANLKLAQT RNFLFPLIEG ISFLSLLALL YFGTEAINQG TISIGDFIAL IILVERLVFP TALLGFTITA YQRGEVSIDR VEAIFQAYPK IKDATNTISI DPQKIKGQLV ARNLNYTYPG STKPALKEVN FTINPGETIA IIGSIGSGKS TLANTLPRLL DIAPGQLFLD DYDVTELKLA DLRGAIAYVP QDSFLFSTTI ENNIRYGDPL KERFEVEYAA KQSQIYEEIL NFPQQYDTLV GERGITLSGG QRQRTALARA LLMDAPVLIL DDALSSVDNK TATNILENLS SQRKKTVIFI THHLSAAAQA DRIFVMNKGQ IIQMGTHQTL LQQPGFYQSL WKQG
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