Gene PCC8801_3969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3969 
Symbol 
ID7105825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp4155540 
End bp4156967 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content46% 
IMG OID643476965 
Productisocitrate dehydrogenase 
Protein accessionYP_002374066 
Protein GI218248695 
COG category[C] Energy production and conversion 
COG ID[COG0538] Isocitrate dehydrogenases 
TIGRFAM ID[TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGAAA AACTAACCCC TCCCTCCACT GGTTCTAAAA TTACCTTTAA AGACGGTAAA 
CCCATTGTTC CCGATGATCC CATCATTCCC TTCATCCGTG GCGATGGAAC AGGGGTAGAT
ATCTGGCCAG CTACCGAAAA AGTCATTGAT GCGGCCGTTA CTACTGCTTA CGGAGGTCAA
CGCAAAATTA ACTGGTTTAA GGTCTATGCA GGGGATGAAG CTTGCGATCT CTACGGAACT
TATCAATACT TACCCGATGA TACCCTAAAA GCCATCGAAG AATATGGTAT TGCCATCAAA
GGACCCTTAA CGACCCCCAT TGGTGGTGGT ATTCGGTCAT TAAACGTCGC GTTACGGCAA
ATTTTCACCC TCTATGCTTG CGTTCGTCCC TGTCGTTACT ATGCGGGAAC CCCTTCCCCC
CACAAGTCCC CCGAAAAACT CGATGTCATC GTCTATCGGG AGAATACCGA GGATATCTAT
CTGGGAATTG AATGGCGAGA AGGCAGCGAA ATTGGGCAAA AATTGATTAA ATACCTCAAT
GATGAGTTAA TTCCCGCCAC TCCTGAACAC GGCAAAAAAC GCATCCCTCT AGACGCAGGA
ATTGGGGTTA AACCCATCAG TAAAACGGGT TCCCAACGGT TAGTTCGTCG CGCAATGGAA
CACGCTTTAC GTCTCCCTAA AGCGAAGCAA ATGGTGACGT TAGTCCACAA AGGGAATATC
ATGAAATATA CCGAGGGAGC GTTTCGAGAT TGGGGGTATG AACTCGCTAC CACAGAATTT
CGGGATGTCT GCGTTACGGA ACGAGAATCT TGGATTTTGA GTAATAAAGA GGGTAATCCT
AATATTAGTA TCGAAGATAA TGCCCGTAAA GTCGAGCCTG GTTACGATGC GCTGACCCCT
GAGAAGAAAA AAGAAGCCTG TGACGAAGTT AAATCGGTTT TAGATGCTAT TTGGGATAGT
CACGGGGATG GTAAATGGAA GGATAAGATC ATGGTGAACG ATCGCATTGC TGATAGTATC
TTCCAACAAA TTCAAACCCG TCCCGATGAA TATTCCATCC TTGCTACCAT GAACCTGAAC
GGGGACTATC TCTCCGATGC TGCTGCTGCG GTGGTTGGTG GTTTAGGAAT GGGACCTGGT
GCCAATATTG GGGATACCTG TGCTATTTTT GAGGCTACCC ACGGAACTGC GCCAAAACAC
GCGGGTTTAG ATCGTATTAA CCCTGGTTCA GTCATTTTAT CGGGGGTAAT GATGTTAGAG
TATATGGGAT GGCAAGAAGC AGCCGATTTG ATTAAAAAAG GGTTGGGAAA TGCGATCGCT
AATCGGGAAG TAACATACGA TTTAGCGCGG TTGATGGAAC CTCCTGTCGA TCCTCCCTTG
AAATGTTCCG AGTTTGCACA AGCCATTATC AATCATTTTG CGGATTAG
 
Protein sequence
MYEKLTPPST GSKITFKDGK PIVPDDPIIP FIRGDGTGVD IWPATEKVID AAVTTAYGGQ 
RKINWFKVYA GDEACDLYGT YQYLPDDTLK AIEEYGIAIK GPLTTPIGGG IRSLNVALRQ
IFTLYACVRP CRYYAGTPSP HKSPEKLDVI VYRENTEDIY LGIEWREGSE IGQKLIKYLN
DELIPATPEH GKKRIPLDAG IGVKPISKTG SQRLVRRAME HALRLPKAKQ MVTLVHKGNI
MKYTEGAFRD WGYELATTEF RDVCVTERES WILSNKEGNP NISIEDNARK VEPGYDALTP
EKKKEACDEV KSVLDAIWDS HGDGKWKDKI MVNDRIADSI FQQIQTRPDE YSILATMNLN
GDYLSDAAAA VVGGLGMGPG ANIGDTCAIF EATHGTAPKH AGLDRINPGS VILSGVMMLE
YMGWQEAADL IKKGLGNAIA NREVTYDLAR LMEPPVDPPL KCSEFAQAII NHFAD