Gene PCC8801_3965 details

Gene Information

• Locus tag: PCC8801_3965
• Symbol: def
• ID: 7103460
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: -
• Start bp: 4152134
• End bp: 4152697
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 643476961
• Product: peptide deformylase
• Protein accession: YP_002374062
• Protein GI: 218248691
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGCTG TAATTGCTGT AGAAAAAGAA AAACTCGAAA ATCCTCCTTT AGAAATTCAC 
TTTCTGGGCG ATCGCGTCCT CCGTCAACCC GCTAAACGCA TCGCTAAAGT TGATGATACT 
ATTCGTCAAC TGGCCAAGGA AATGCTCCAA ACGATGTACA GTTCTAACGG GATCGGGTTA 
GCTGCTCCCC AAGTTGGCGT ACATAAGCAA TTAATCGTCG TAGACTGTGA TCCCAATGAT 
CCCGCTAATC AGCCAATTAT CTTGATCAAT CCCCAAATTA CTCGGTTTTC TCAAGAATTA 
TGCGTTGTTG AAGAAGGATG TCTCAGTATT CCAGGGGTTT ATTTAGACGT AACTCGTCCT 
AAAGCGATCG AAGTCAGTTT TAGAGATGAA CAAGGAAAAC CTCGCAAACT CCAGGCCACA 
GACTTATTAG CGCGAGTCAT TCAACATGAG ATGGATCACC TCAATGGGGT CATGTTTGTT 
GATCGCGTCA ATAATGGGTT AGCCTTAACG GAATCCCTGC AAAAAAATGG CTTTTCGGTA 
CAAGCCGTTA AACCCGTCAA GTAA 

 

Protein sequence

MTAVIAVEKE KLENPPLEIH FLGDRVLRQP AKRIAKVDDT IRQLAKEMLQ TMYSSNGIGL 
AAPQVGVHKQ LIVVDCDPND PANQPIILIN PQITRFSQEL CVVEEGCLSI PGVYLDVTRP 
KAIEVSFRDE QGKPRKLQAT DLLARVIQHE MDHLNGVMFV DRVNNGLALT ESLQKNGFSV 
QAVKPVK