| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_3962 |
|---|
| Symbol | |
|---|
| ID | 7103457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | - |
|---|
| Start bp | 4149145 |
|---|
| End bp | 4150797 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643476958 |
|---|
| Product | putative glycosyl transferase |
|---|
| Protein accession | YP_002374059 |
|---|
| Protein GI | 218248688 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACGTGGC AACAATCGGT CTTTCAGATT TTGCTAGTAG GATTGGTTTT TCGTTCCATT
CTTGCCTTAT GGTTGTTTCC TGGCTACGAT GAAGGCTATT ATTATCTCTA TAGTCAACAT
TTAGATTGGA GTTACTTTGA TCATCCACCT TTAGTTGCTT TAACAACGGG GTTTGGTGTT
TGGTTAACGG GAATTGCTTC ACCATTTACA CTCCGTTTAG GGACACTAAT TTTATATACA
GGCAGTCTTT TACTATTATA TCTCACCAGT GCTCGATTAT TTAATCATCA AGGGGCAAAA
ATAACATTAA TTATTGCTTC TATTATTCCT ATCTTTACCG TAGGTTTTGG GGTAATTACG
CTTCCTGATA GTCCTTTAAT CTTTTTTTGG TCAGCAAGTT TATATTGCGC GGTTTGTGAA
TTTTTTCCAA CAGCTAATCA AAGTTATCGT CCTAGCTATC GCCTTAGTAT TTTAGGAATT
TTGGTTGGGT TAGCTTGTTT GAGTAAATAT CATGGCTTTA TTCTAGCATT AGGATTAATT
GCCTTTTGTC TAACCAGTTC TAAGCATCGC TGTGCTTTAT TCTCTCCGTG GATGGGACTA
GCAATAGGAT TATTTATCAT CACGCTATTT CCTCTTTGGT TTTGGAATTT ACAGCATAAT
TGGGTTTCTT TACGATTTCA GTTATTTCAT CGCTTTGATC CTCCACCAGA GGGAATTGTT
TCACCTTCTG GCTATAATTT ATTGAAAGTT TTTGGGGTTT TTTTGACAGG TATAGGCTTA
CTTTTTCCGA CGATTGGTTT TCCTTTATGG TGGGTTAATC TACGAACGCT AATCAATCAA
TTTTCTGATA TTTTTCCGCA CAAATGGCTT CAATATTCAT GGGTTTTTCC TCTAAGGGAA
AGGGATGATT TTTTAAAAGA AAAACAGTTA TTAATTCTCT GGGTTTCTTT GCCGTTAATG
GTAGGATTTA CTCTGTTAGG AGGAAAACAA CAAATTCTTG TTACTTGGCC TATCCCTGGA
TTTTGGGGAG CCACTTTATT ATTAGGAATT TATGCGTTTC AATGGCAACA GAGATCGCGT
TATCTTATTA GATGGTGGTT AGGAGGAACA GGGATTATTA TTTCGACTAT TTTATTTCTA
TTGCTGCTAC ATATTACTAC AGGAACCCTA CAAAAATCCA GTCATTCTGC TATCTTTGGC
GGATTTTTGG AGCCTAAAAG TGATCCCGCT AATGAATTGA TTGATATTCA ACAACTCCGT
CAAGGGTTTG CTTCATCTCC TGTGCTTTTA AATGCTTTAC AAAACAGTCA TTTTATCTTT
AGTAATGCCT ATTACTTAGG AGGATTAATA GATTTAGCCC TCAGACCTCT AAACCCTATC
CCCGTGACTT GTTTTAGTTA CGATAGACGG GGATTTTCAT TTTGGCCGGA TACTGATCAA
TGGATAGGAG AAGATGCTCT TTATATTACC CTAGAAAGAT TCCATAAAAT GCCTCATTTA
AACAATGAAT TTAGGGATTA CTTCTTGAGT TTTCAAGAAA TTGGAACAGT TCCTATCCAA
CGAGGAGGGG TCGTTGTTAC CATTTTTCAT GTGTATCAAG CCAAAACATT ATTAAGACCC
TATAGTAGTC CAATCAATAA TCAATTGAAC TAG
|
|---|
| Protein sequence | MTWQQSVFQI LLVGLVFRSI LALWLFPGYD EGYYYLYSQH LDWSYFDHPP LVALTTGFGV
WLTGIASPFT LRLGTLILYT GSLLLLYLTS ARLFNHQGAK ITLIIASIIP IFTVGFGVIT
LPDSPLIFFW SASLYCAVCE FFPTANQSYR PSYRLSILGI LVGLACLSKY HGFILALGLI
AFCLTSSKHR CALFSPWMGL AIGLFIITLF PLWFWNLQHN WVSLRFQLFH RFDPPPEGIV
SPSGYNLLKV FGVFLTGIGL LFPTIGFPLW WVNLRTLINQ FSDIFPHKWL QYSWVFPLRE
RDDFLKEKQL LILWVSLPLM VGFTLLGGKQ QILVTWPIPG FWGATLLLGI YAFQWQQRSR
YLIRWWLGGT GIIISTILFL LLLHITTGTL QKSSHSAIFG GFLEPKSDPA NELIDIQQLR
QGFASSPVLL NALQNSHFIF SNAYYLGGLI DLALRPLNPI PVTCFSYDRR GFSFWPDTDQ
WIGEDALYIT LERFHKMPHL NNEFRDYFLS FQEIGTVPIQ RGGVVVTIFH VYQAKTLLRP
YSSPINNQLN
|
|---|
| |